Identification of chromosomal regions linked to premature myocardial infarction: a meta-analysis of whole-genome searches

被引:22
作者
Zintzaras, Elias [1 ]
Kitsios, Georgios [1 ]
机构
[1] Univ Thessaly, Sch Med, Dept Biomath, Larisa 41222, Greece
关键词
genome search; meta-analysis; heterogeneity; GSMA; HEGESMA; premature; myocardial infarction;
D O I
10.1007/s10038-006-0053-x
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Myocardial infarction (MI) is a complication of coronary artery disease and the leading cause of death in the Western world. MI is considered a distinct phenotype with an increased genetic component for its premature type. MI's exact inheritance pattern is still unknown. Genome searches for identifying susceptibility loci for premature MI produced inconclusive or inconsistent results. Thus, a genome search meta-analysis (GSMA) was applied to available genome search data on premature MI. GSMA is a non-parametric method to identify genetic regions that rank high, on average in terms of linkage statistics across genome searches unweighted or weighted by study size. The significance of each region's average and heterogeneity, unadjusted or adjusted by neighbouring average simulated ranks, was calculated using a Monte Carlo test. The meta-analysis involved five genome searches in Caucasians. Eight regions (6p22.3-6p21.1, 14p13-14q13.1, 13q33.1-13q34, 5p15.33-5p15.1, 8q13.2-8q22.2, 1p36.21-1p35.2, 12q24.31-12q24.33, 8q24.21-8q24.3) were found to have significant average rank by either unweighted or weighted analyses. In addition, region 8q24.21-8q24.3 produced significant low heterogeneity (P-unadjusted = 0.03 and P-adjusted = 0.05). Four regions (6p22.3-6p21.1, 14p13-14q13.1, 8q13.2-8q22.2, 8q24.21-8q24.3) were not identified by the individual studies. The meta-analysis suggests that these four regions should be further investigated for genes that confer susceptibility to MI.
引用
收藏
页码:1015 / 1021
页数:7
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共 36 条
  • [1] Regional meta-analysis of published data supports linkage of autism with markers on chromosome 7
    Badner, JA
    Gershon, ES
    [J]. MOLECULAR PSYCHIATRY, 2002, 7 (01) : 56 - 66
  • [2] Analysis of the association of a heat shock protein70-1 gene promoter polymorphism with myocardial infarction and coronary risk traits
    Bolla, MK
    Miller, GJ
    Yellon, DM
    Evans, A
    Luc, G
    Cambou, JP
    Arveiler, D
    Cambien, F
    Latchman, DS
    Humphries, SE
    Day, INM
    [J]. DISEASE MARKERS, 1998, 13 (04) : 227 - 235
  • [3] A comprehensive linkage analysis for myocardial infarction and its related risk factors
    Broeckel, U
    Hengstenberg, C
    Mayer, B
    Holmer, S
    Martin, LJ
    Comuzzie, AG
    Blangero, J
    Nürnberg, P
    Reis, A
    Riegger, GAJ
    Jacob, HJ
    Schunkert, H
    [J]. NATURE GENETICS, 2002, 30 (02) : 210 - 214
  • [4] Influence of a methionine synthase (D919G) polymorphism on plasma homocysteine and folate levels and relation to risk of myocardial infarction
    Chen, J
    Stampfer, MJ
    Ma, J
    Selhub, J
    Malinow, MR
    Hennekens, CH
    Hunter, DJ
    [J]. ATHEROSCLEROSIS, 2001, 154 (03) : 667 - 672
  • [5] The genetic basis of plasma variation in adiponectin, a global endophenotype for obesity and the metabolic syndrome
    Comuzzie, AG
    Funahashi, T
    Sonnenberg, G
    Martin, LJ
    Jacob, HJ
    Black, AEK
    Maas, D
    Takahashi, M
    Kihara, S
    Tanaka, S
    Matsuzawa, Y
    Blangero, J
    Cohen, D
    Kissebah, A
    [J]. JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2001, 86 (09) : 4321 - 4325
  • [6] Meta-analysis of linkage studies for complex diseases: An overview of methods and a simulation study
    Dempfle, A
    Loesgen, S
    [J]. ANNALS OF HUMAN GENETICS, 2004, 68 : 69 - 83
  • [7] Familial patterns of covariation for cardiovascular risk factors in adults - The Victorian Family Heart Study
    Harrap, SB
    Stebbing, M
    Hopper, JL
    Hoang, HN
    Giles, GG
    [J]. AMERICAN JOURNAL OF EPIDEMIOLOGY, 2000, 152 (08) : 704 - 715
  • [8] A genomewide scan for early-onset coronary artery disease in 438 families: The GENECARD Study
    Hauser, ER
    Crossman, DC
    Granger, CB
    Haines, JL
    Jones, CJH
    Mooser, V
    McAdam, B
    Winkelmann, BR
    Wiseman, AH
    Muhlestein, JB
    Bartel, AG
    Dennis, CA
    Dowdy, E
    Estabrooks, S
    Eggleston, K
    Francis, S
    Roche, K
    Clevenger, PW
    Huang, L
    Pedersen, B
    Shah, S
    Schmidt, S
    Haynes, C
    West, S
    Asper, D
    Booze, M
    Sharma, S
    Sundseth, S
    Middleton, L
    Roses, AD
    Hauser, MA
    Vance, JM
    Pericak-Vance, MA
    Kraus, WE
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2004, 75 (03) : 436 - 447
  • [9] The gene encoding 5-lipoxygenase activating protein confers risk of myocardial infarction and stroke
    Helgadottir, A
    Manolescu, A
    Thorleifsson, G
    Gretarsdottir, S
    Jonsdottir, H
    Thorsteinsdottir, U
    Samani, NJ
    Gudmundsson, G
    Grant, SFA
    Thorgeirsson, G
    Sveinbjornsdottir, S
    Valdimarsson, EM
    Matthiasson, SE
    Johannsson, H
    Gudmundsdottir, O
    Gurney, ME
    Sainz, J
    Thorhallsdottir, M
    Andresdottir, M
    Frigge, ML
    Topol, EJ
    Kong, A
    Gudnason, V
    Hakonarson, H
    Gulcher, JR
    Stefansson, K
    [J]. NATURE GENETICS, 2004, 36 (03) : 233 - 239
  • [10] Evaluation of the aldosterone synthase (CYP11B2) gene polymorphism in patients with myocardial infarction
    Hengstenberg, C
    Holmer, SR
    Mayer, B
    Löwel, H
    Engel, S
    Hense, HW
    Riegger, GAJ
    Schunkert, H
    [J]. HYPERTENSION, 2000, 35 (03) : 704 - 709