MPSA:: integrated system for multiple protein sequence analysis with client/server capabilities

被引:20
作者
Blanchet, C [1 ]
Combet, C [1 ]
Geourjon, C [1 ]
Deléage, G [1 ]
机构
[1] Inst Biol & Chim Prot, BCP, CNRS UPR 412, Lab Conformat Prot, F-69367 Lyon 07, France
关键词
D O I
10.1093/bioinformatics/16.3.286
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
MPSA is a stand-alone software intended to protein sequence analysis with a high integration level and Web clients/server capabilities. Ir provides many methods and tools, which are integrated into an interactive graphical user interface. It is available for most Unix/Linux and non-Unix systems. MPSA is able to connect to a Web sewer (e.g. http://pbil.ibcp.fr/NPSA) in order to perform large-scale sequence comparison on up-to-date databanks.
引用
收藏
页码:286 / 287
页数:2
相关论文
共 5 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]   The PROSITE database, its status in 1995 [J].
Bairoch, A ;
Bucher, P ;
Hofmann, K .
NUCLEIC ACIDS RESEARCH, 1996, 24 (01) :189-196
[3]   IMPROVED TOOLS FOR BIOLOGICAL SEQUENCE COMPARISON [J].
PEARSON, WR ;
LIPMAN, DJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (08) :2444-2448
[4]  
Rost B, 1997, COMPUT APPL BIOSCI, V13, P345
[5]   CLUSTAL-W - IMPROVING THE SENSITIVITY OF PROGRESSIVE MULTIPLE SEQUENCE ALIGNMENT THROUGH SEQUENCE WEIGHTING, POSITION-SPECIFIC GAP PENALTIES AND WEIGHT MATRIX CHOICE [J].
THOMPSON, JD ;
HIGGINS, DG ;
GIBSON, TJ .
NUCLEIC ACIDS RESEARCH, 1994, 22 (22) :4673-4680