Paraspeckles: nuclear bodies built on long noncoding RNA

被引:377
作者
Bond, Charles S. [2 ]
Fox, Archa H. [1 ]
机构
[1] Univ Western Australia, Med Res Ctr, Western Australian Inst Med Res, Crawley, WA 6009, Australia
[2] Univ Western Australia, Med Res Ctr, Sch Biomed Biomol & Chem Sci, Crawley, WA 6009, Australia
关键词
MESSENGER-RNA; SPLICING FACTOR; PROTEIN P54(NRB); 68-KDA SUBUNIT; DOMAIN; PSF; EXPRESSION; LOCALIZATION; BINDING; CELLS;
D O I
10.1083/jcb.200906113
中图分类号
Q2 [细胞生物学];
学科分类号
071013 [干细胞生物学];
摘要
Paraspeckles are ribonucleoprotein bodies found in the interchromatin space of mammalian cell nuclei. These structures play a role in regulating the expression of certain genes in differentiated cells by nuclear retention of RNA. The core paraspeckle proteins (PSF/SFPQ, P54NRB/NONO, and PSPC1 [ paraspeckle protein 1]) are members of the DBHS ( Drosophila melanogaster behavior, human splicing) family. These proteins, together with the long nonprotein-coding RNA NEAT1 (MEN-epsilon/beta), associate to form paraspeckles and maintain their integrity. Given the large numbers of long noncoding transcripts currently being discovered through whole transcriptome analysis, paraspeckles may be a paradigm for a class of sub-nuclear bodies formed around long noncoding RNA.
引用
收藏
页码:637 / 644
页数:8
相关论文
共 54 条
[1]
A coactivator trap identifies NONO (p54nrb) as a component of the cAMP-signaling pathway [J].
Amelio, Antonio L. ;
Miraglia, Loren J. ;
Conkright, Juliana J. ;
Mercer, Becky A. ;
Batalov, Serge ;
Cavett, Valerie ;
Orth, Anthony P. ;
Busby, Jennifer ;
Hogenesch, John B. ;
Conkright, Michael D. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (51) :20314-20319
[2]
ANDERSON DF, 2002, INT J COMMUTATIVE RI, V1, P11
[3]
PERIOD1-associated proteins modulate the negative limb of the mammalian circadian oscillator [J].
Brown, SA ;
Ripperger, J ;
Kadener, S ;
Fleury-Olela, F ;
Vilbois, F ;
Rosbash, M ;
Schibler, U .
SCIENCE, 2005, 308 (5722) :693-696
[4]
Subnuclear localization and dynamics of the pre-mRNA 3′ end processing factor mammalian cleavage factor I 68-kDa subunit [J].
Cardinale, Stefano ;
Cisterna, Barbara ;
Bonetti, Paolo ;
Aringhieri, Chiara ;
Biggiogera, Marco ;
Barabino, Silvia M. L. .
MOLECULAR BIOLOGY OF THE CELL, 2007, 18 (04) :1282-1292
[5]
The transcriptional landscape of the mammalian genome [J].
Carninci, P ;
Kasukawa, T ;
Katayama, S ;
Gough, J ;
Frith, MC ;
Maeda, N ;
Oyama, R ;
Ravasi, T ;
Lenhard, B ;
Wells, C ;
Kodzius, R ;
Shimokawa, K ;
Bajic, VB ;
Brenner, SE ;
Batalov, S ;
Forrest, ARR ;
Zavolan, M ;
Davis, MJ ;
Wilming, LG ;
Aidinis, V ;
Allen, JE ;
Ambesi-Impiombato, X ;
Apweiler, R ;
Aturaliya, RN ;
Bailey, TL ;
Bansal, M ;
Baxter, L ;
Beisel, KW ;
Bersano, T ;
Bono, H ;
Chalk, AM ;
Chiu, KP ;
Choudhary, V ;
Christoffels, A ;
Clutterbuck, DR ;
Crowe, ML ;
Dalla, E ;
Dalrymple, BP ;
de Bono, B ;
Della Gatta, G ;
di Bernardo, D ;
Down, T ;
Engstrom, P ;
Fagiolini, M ;
Faulkner, G ;
Fletcher, CF ;
Fukushima, T ;
Furuno, M ;
Futaki, S ;
Gariboldi, M .
SCIENCE, 2005, 309 (5740) :1559-1563
[6]
Alu element-mediated gene silencing [J].
Chen, Ling-Ling ;
DeCerbo, Joshua N. ;
Carmichael, Gordon G. .
EMBO JOURNAL, 2008, 27 (12) :1694-1705
[7]
Altered Nuclear Retention of mRNAs Containing Inverted Repeats in Human Embryonic Stem Cells: Functional Role of a Nuclear Noncoding RNA [J].
Chen, Ling-Ling ;
Carmichael, Gordon G. .
MOLECULAR CELL, 2009, 35 (04) :467-478
[8]
An Architectural Role for a Nuclear Noncoding RNA: NEAT1 RNA Is Essential for the Structure of Paraspeckles [J].
Clemson, Christine M. ;
Hutchinson, John N. ;
Sara, Sergio A. ;
Ensminger, Alexander W. ;
Fox, Archa H. ;
Chess, Andrew ;
Lawrence, Jeanne B. .
MOLECULAR CELL, 2009, 33 (06) :717-726
[9]
Distinct sequence motifs within the 68-kDa subunit of cleavage factor Im mediate RNA binding, protein-protein interactions, and subcellular localization [J].
Dettwiler, S ;
Aringhieri, C ;
Cardinale, S ;
Keller, W ;
Barabino, SML .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (34) :35788-35797
[10]
PURIFICATION AND CDNA CLONING OF HELA-CELL P54(NRB), A NUCLEAR-PROTEIN WITH 2 RNA RECOGNITION MOTIFS AND EXTENSIVE HOMOLOGY TO HUMAN SPLICING FACTOR PSF AND DROSOPHILA NONA/BJ6 [J].
DONG, BH ;
HOROWITZ, DS ;
KOBAYASHI, R ;
KRAINER, AR .
NUCLEIC ACIDS RESEARCH, 1993, 21 (17) :4085-4092