Spectroscopic measurement of a long-predicted active site pK in iron-superoxide dismutase from Escherichia coli

被引:35
作者
Sorkin, DL [1 ]
Miller, AF [1 ]
机构
[1] JOHNS HOPKINS UNIV, DEPT CHEM, BALTIMORE, MD 21218 USA
关键词
D O I
10.1021/bi963047z
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The accepted mechanism of Fe-containing superoxide dismutase (Fe-SOD) activity and inhibition by anions implies the existence of a group with a pK of 8.6-9.0 in the active site of reduced Fe-SOD [Bull, C. & Fee, J. A. (1985) J. Am. Chem. Sec. 107, 3295-3304]. We have performed pH titrations of reduced Fe-SOD by NMR spectroscopy and observe a pK of 8.5 at 30 degrees C which is the only pK affecting the active site between pH 5.5 and 10.5. Thus, we present the first spectroscopic evidence of the predicted pK. Although the pK is associated with chemical shift changes for almost all of the resonances of the active site, resonance line widths and the T-1 of a ligand proton are not significantly affected by the pK, indicating that there is no significant conformational change and only relatively minor effects on the electronic spin properties of Fe2+. The changes in chemical shift are probably caused by changes in hydrogen bonding to a ligand and attendant subtle perturbation of the Fe2+ paramagnetism upon loss of the proton with the pK of 8.5. The pK is also associated with a dramatic restriction of the exchange of at least one ligand proton. Thus, active site accessibility to solvent and OH- decreases by more than 2 orders of magnitude upon loss of the proton with the pK of 8.5. Since OH- is a competitive inhibitor of Fe-SOD, and thus a substrate analog, this dramatic and unusual decrease in accessibility to OH- is consistent with the increase in the K-M for O2(.-) that is associated with a pK near 9.
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页码:4916 / 4924
页数:9
相关论文
共 47 条
[1]   PRIMARY STRUCTURE EFFECTS ON PEPTIDE GROUP HYDROGEN-EXCHANGE [J].
BAI, YW ;
MILNE, JS ;
MAYNE, L ;
ENGLANDER, SW .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1993, 17 (01) :75-86
[2]   PROTEIN-FOLDING INTERMEDIATES - NATIVE-STATE HYDROGEN-EXCHANGE [J].
BAI, YW ;
SOSNICK, TR ;
MAYNE, L ;
ENGLANDER, SW .
SCIENCE, 1995, 269 (5221) :192-197
[3]   Characterization of the pH titration shifts of ribonuclease a by one- and two-dimensional nuclear magnetic resonance spectroscopy [J].
Baker, WR ;
Kintanar, A .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1996, 327 (01) :189-199
[4]   ASPECTS OF THE STRUCTURE, FUNCTION, AND APPLICATIONS OF SUPEROXIDE-DISMUTASE [J].
BANNISTER, JV ;
BANNISTER, WH ;
ROTILIO, G .
CRC CRITICAL REVIEWS IN BIOCHEMISTRY, 1987, 22 (02) :111-180
[5]  
BERTINI L, 1986, NMR PARAMAGNETIC MOL
[6]  
BEYER W, 1991, PROG NUCLEIC ACID RE, V40, P221
[7]   PKA AND ISOMER DETERMINATIONS OF COBALT(III) IMIDAZOLE AND HISTIDINE COMPLEXES BY NMR AND X-RAY CRYSTALLOGRAPHY [J].
BRODSKY, NR ;
NGUYEN, NM ;
ROWAN, NS ;
STORM, CB ;
BUTCHER, RJ ;
SINN, E .
INORGANIC CHEMISTRY, 1984, 23 (07) :891-897
[8]   STEADY-STATE KINETIC-STUDIES OF SUPEROXIDE DISMUTASES - PROPERTIES OF THE IRON CONTAINING PROTEIN FROM ESCHERICHIA-COLI [J].
BULL, C ;
FEE, JA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1985, 107 (11) :3295-3304
[9]  
CARLIOZ A, 1988, J BIOL CHEM, V263, P1555
[10]   ISOLATION OF SUPEROXIDE-DISMUTASE MUTANTS IN ESCHERICHIA-COLI - IS SUPEROXIDE-DISMUTASE NECESSARY FOR AEROBIC LIFE [J].
CARLIOZ, A ;
TOUATI, D .
EMBO JOURNAL, 1986, 5 (03) :623-630