Effect of pressure on the crystal structure of salicylaldoxime-I, and the structure of salicylaldoxime-II at 5.93 GPa

被引:48
作者
Wood, Peter A.
Forgan, Ross S.
Henderson, David
Parsons, Simon
Pidcock, Elna
Tasker, Peter A.
Warren, John E.
机构
[1] Univ Edinburgh, Sch Chem, Edinburgh EH9 3JJ, Midlothian, Scotland
[2] Univ Edinburgh, Ctr Sci Extremem Condit, Edinburgh EH9 3JJ, Midlothian, Scotland
[3] Cambridge Crystallog Data Ctr, Cambridge CB2 1EZ, England
[4] CCLRC, Daresbury Lab, Warrington WA4 4AD, Cheshire, England
来源
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE | 2006年 / 62卷 / 06期
关键词
D O I
10.1107/S0108768106031752
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The effect of pressure on the crystal structure of salicylaldoxime has been investigated. The ambient- pressure phase (salicylaldoxime-I) consists of pairs of molecules interacting through oximic OH(...)O hydrogen bonds; taken with phenolic OH(...)N intramolecular hydrogen bonds, these dimers form a pseudo-macrocycle bounded by an R(4)(4)(10) motif. The dimers interact principally via pi(...)pi stacking contacts. Salicylaldoxime derivatives are used industrially as selective solvent extractants for copper; the selectivity reflects the compatibility of the metal ion with the pseudo-macrocycle cavity size. On increasing the pressure to 5.28 GPa the size of the cavity was found to decrease by an amount comparable to the difference in hole sizes in the structures of the Cu(2+) salicylaldoximato complex and its Ni(2+) equivalent. On increasing the pressure to 5.93 GPa a new polymorph, salicylaldoxime-II, was obtained in a single-crystal to single-crystal phase transition. PIXEL calculations show that the phase transition is driven in part by relief of intermolecular repulsions in the dimer-forming OH(...)O-bonded ring motif, and the ten-centre hydrogenbonding ring motif of the phase I structure is replaced in phase II by a six-centre ring formed by oximic OH(...)N hydrogen bonds. The transition also relieves repulsions in the pi(...)pi stacking contacts. The intramolecular OH(...)N hydrogen bond of phase I is replaced in phase II by a intermolecular phenolic OH(...)O hydrogen bond, but the total interaction energy of the pairs of molecules connected by this new contact is very slightly repulsive because the electrostatic hydrogen-bond energy is cancelled by the repulsion term. The intra- to intermolecular hydrogen-bond conversion simply promotes efficient packing rather than contributing to the overall lattice energy.
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页码:1099 / 1111
页数:13
相关论文
共 53 条
[1]   Applications of the Cambridge Structural Database in organic chemistry and crystal chemistry [J].
Allen, FH ;
Motherwell, WDS .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE CRYSTAL ENGINEERING AND MATERIALS, 2002, 58 :407-422
[2]   The Cambridge Structural Database: a quarter of a million crystal structures and rising [J].
Allen, FH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 2002, 58 (3 PART 1) :380-388
[3]   SIR92 - a program for automatic solution of crystal structures by direct methods [J].
ALTOMARE, A ;
CASCARANO, G ;
GIACOVAZZO, G ;
GUAGLIARDI, A ;
BURLA, MC ;
POLIDORI, G ;
CAMALLI, M .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1994, 27 :435-435
[4]  
Angel RJ, 2004, NATO SCI SER II-MATH, V140, P21
[5]   Equations of state [J].
Angel, RJ .
HIGH-TEMPERATURE AND HIGH-PRESSURE CRYSTAL CHEMISTRY, 2000, 41 :35-59
[6]  
ANGEL RJ, 2002, EOSFIT VERSION 5 2
[7]  
[Anonymous], 1993, CAMERON
[8]   PATTERNS IN HYDROGEN BONDING - FUNCTIONALITY AND GRAPH SET ANALYSIS IN CRYSTALS [J].
BERNSTEIN, J ;
DAVIS, RE ;
SHIMONI, L ;
CHANG, NL .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 1995, 34 (15) :1555-1573
[9]   CRYSTALS version 12: software for guided crystal structure analysis [J].
Betteridge, PW ;
Carruthers, JR ;
Cooper, RI ;
Prout, K ;
Watkin, DJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2003, 36 :1487-1487
[10]   FINITE ELASTIC STRAIN OF CUBIC CRYSTALS [J].
BIRCH, F .
PHYSICAL REVIEW, 1947, 71 (11) :809-824