Kinetics and mechanism of proton transport across membrane nanopores

被引:81
作者
Dellago, Christoph
Hummer, Gerhard
机构
[1] Univ Vienna, Fac Phys, A-1090 Vienna, Austria
[2] NIDDKD, Phys Chem Lab, NIH, Bethesda, MD 20892 USA
关键词
D O I
10.1103/PhysRevLett.97.245901
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
We use computer simulations to study the kinetics and mechanism of proton passage through a narrow-pore carbon-nanotube membrane separating reservoirs of liquid water. Free energy and rate constant calculations show that protons move across the membrane diffusively along single-file chains of hydrogen-bonded water molecules. Proton passage through the membrane is opposed by a high barrier in the effective potential, reflecting the large electrostatic penalty for desolvation and reminiscent of charge exclusion in biological water channels. At neutral pH, we estimate a translocation rate of about 1 proton per hour and tube.
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页数:4
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共 33 条
[1]  
Agmon N, 1999, ISR J CHEM, V39, P493
[2]  
Bennett C. H., 1977, ACS S SERIES, V46
[3]   Reaction coordinates and rates from transition paths [J].
Best, RB ;
Hummer, G .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (19) :6732-6737
[4]   The formation and dynamics of proton wires in channel environments [J].
Brewer, ML ;
Schmitt, UW ;
Voth, GA .
BIOPHYSICAL JOURNAL, 2001, 80 (04) :1691-1702
[5]   STATISTICAL-MECHANICS OF ISOMERIZATION DYNAMICS IN LIQUIDS AND TRANSITION-STATE APPROXIMATION [J].
CHANDLER, D .
JOURNAL OF CHEMICAL PHYSICS, 1978, 68 (06) :2959-2970
[6]   A second generation multistate empirical valence bond model for proton transport in aqueous systems [J].
Day, TJF ;
Soudackov, AV ;
Cuma, M ;
Schmitt, UW ;
Voth, GA .
JOURNAL OF CHEMICAL PHYSICS, 2002, 117 (12) :5839-5849
[7]   Proton transport through water-filled carbon nanotubes [J].
Dellago, C ;
Naor, MM ;
Hummer, G .
PHYSICAL REVIEW LETTERS, 2003, 90 (10) :4-105902
[8]   Transition path sampling and the calculation of rate constants [J].
Dellago, C ;
Bolhuis, PG ;
Csajka, FS ;
Chandler, D .
JOURNAL OF CHEMICAL PHYSICS, 1998, 108 (05) :1964-1977
[9]   Transition path sampling [J].
Dellago, C ;
Bolhuis, PG ;
Geissler, PL .
ADVANCES IN CHEMICAL PHYSICS, VOL 123, 2002, 123 :1-78
[10]  
DELLAGO C, IN PRESS