Complete nucleotide sequence of the genomic RNA of a French isolate of Pepino mosaic virus (PepMV)

被引：67

作者：

Cotillon, AC ^{[1
]}

Girard, M ^{[1
]}

Ducouret, S ^{[1
]}

机构：

[1] Lab Natl Prot Vegetaux, Unite Virol Plantes Herbacees, Montfavet, France

来源：

ARCHIVES OF VIROLOGY | 2002年 / 147卷 / 11期

关键词：

D O I：

10.1007/s00705-002-0873-8

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

The complete nucleotide sequence of the genomic RNA of a French isolate of Pepino mosaic virus (PepMV) was determined. With a length of 6425 nucleotides excluding the poly(A) tail at the 3' terminus, the PepMV genome contains five major open reading frames encoding a 164 kDa replicase, triple gene block proteins of 26 kDa, 14 kDa and 9 kDa, and a 25 kDa coat protein. This genome organization, as well as characteristic consensus motifs and high degrees of similarity of PepMV proteins with those of other potexviruses confirmed that PepMV belongs to the Potexvirus genus. Phylogenetic analyses carried out on replicase, triple gene block protein 1 and coat protein amino acid sequences revealed that PepMV is closely related to species Narcissus mosaic virus (NMV), Scallion virus X (SVX), Cymbidium mosaic virus (CymMV), and Potato aucuba mosaic virus (PAMV).

引用

页码：2231 / 2238

页数：8

共 20 条

[1] THE ENTIRE NUCLEOTIDE-SEQUENCE OF FOXTAIL MOSAIC-VIRUS RNA [J].

BANCROFT, JB ;

ROULEAU, M ;

JOHNSTON, R ;

PRINS, L ;

MACKIE, GA .

JOURNAL OF GENERAL VIROLOGY, 1991, 72 :2173-2181

[2]

BUNDIN VS, 1986, DOKL AKAD NAUK SSSR+, V290, P728

[3]

CHOMCZYNSKI P, 1993, BIOTECHNIQUES, V15, P532

[4] PHYLOGENY OF CAPSID PROTEINS OF ROD-SHAPED AND FILAMENTOUS RNA PLANT-VIRUSES - 2 FAMILIES WITH DISTINCT PATTERNS OF SEQUENCE AND PROBABLY STRUCTURE CONSERVATION [J].

DOLJA, VV ;

BOYKO, VP ;

AGRANOVSKY, AA ;

KOONIN, EV .

VIROLOGY, 1991, 184 (01) :79-86

[5] THE COMPLETE NUCLEOTIDE-SEQUENCE OF THE POTEXVIRUS WHITE CLOVER MOSAIC-VIRUS [J].

FORSTER, RLS ;

BEVAN, MW ;

HARBISON, SA ;

GARDNER, RC .

NUCLEIC ACIDS RESEARCH, 1988, 16 (01) :291-303

[6] CHARACTERIZATION AND ENGINEERING OF SEQUENCES CONTROLLING INVIVO SYNTHESIS OF BROME MOSAIC-VIRUS SUBGENOMIC RNA [J].

FRENCH, R ;

AHLQUIST, P .

JOURNAL OF VIROLOGY, 1988, 62 (07) :2411-2420

[7] THE COMPLETE NUCLEOTIDE-SEQUENCE OF POTATO VIRUS-X AND ITS HOMOLOGIES AT THE AMINO-ACID LEVEL WITH VARIOUS PLUS-STRANDED RNA VIRUSES [J].

HUISMAN, MJ ;

LINTHORST, HJM ;

BOL, JF ;

CORNELISSEN, BJC .

JOURNAL OF GENERAL VIROLOGY, 1988, 69 :1789-1798

[8] PEPINO MOSAIC-VIRUS, A NEW POTEXVIRUS FROM PEPINO (SOLANUM-MURICATUM) [J].

JONES, RAC ;

KOENIG, R ;

LESEMANN, DE .

ANNALS OF APPLIED BIOLOGY, 1980, 94 (01) :61-&

[9]

Kadare G, 1997, J VIROL, V71, P2583

[10]

KAMER G, 1984, NUCLEIC ACIDS RES, V12, P7269, DOI 10.1093/nar/12.18.7269

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