A synchronized quorum of genetic clocks

被引:749
作者
Danino, Tal [1 ]
Mondragon-Palomino, Octavio [1 ]
Tsimring, Lev [2 ]
Hasty, Jeff [1 ,2 ,3 ]
机构
[1] Univ Calif San Diego, Dept Bioengn, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, BioCircuits Inst, La Jolla, CA 92093 USA
[3] Univ Calif, Div Biol Sci, Mol Biol Sect, La Jolla, CA 92093 USA
基金
美国国家卫生研究院;
关键词
BACILLUS-THURINGIENSIS; QUENCHING LACTONASE; CELL COMMUNICATION; ESCHERICHIA-COLI; TOGGLE SWITCH; EXPRESSION; NETWORK; BEHAVIOR; OSCILLATORS; RHYTHMS;
D O I
10.1038/nature08753
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The engineering of genetic circuits with predictive functionality in living cells represents a defining focus of the expanding field of synthetic biology. This focus was elegantly set in motion a decade ago with the design and construction of a genetic toggle switch and an oscillator, with subsequent highlights that have included circuits capable of pattern generation, noise shaping, edge detection and event counting. Here we describe an engineered gene network with global intercellular coupling that is capable of generating synchronized oscillations in a growing population of cells. Using microfluidic devices tailored for cellular populations at differing length scales, we investigate the collective synchronization properties along with spatiotemporal waves occurring at millimetre scales. We use computational modelling to describe quantitatively the observed dependence of the period and amplitude of the bulk oscillations on the flow rate. The synchronized genetic clock sets the stage for the use of microbes in the creation of a macroscopic biosensor with an oscillatory output. Furthermore, it provides a specific model system for the generation of a mechanistic description of emergent coordinated behaviour at the colony level.
引用
收藏
页码:326 / 330
页数:5
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