Hsc70 ATPase:: An insight into water dissociation and joint catalytic role of K+ and Mg2+ metal cations in the hydrolysis reaction

被引:53
作者
Boero, Mauro
Ikeda, Takashi
Ito, Etsuro
Terakura, Kiyoyuki
机构
[1] Univ Tsukuba, Ctr Computat Sci, Tsukuba, Ibaraki 3058577, Japan
[2] Japan Sci & Technol Agcy, CREST, Kawaguchi, Saitama 3320012, Japan
[3] Tokushima Bunri Univ, Fac Pharmaceut Sci, Sanuki 7692193, Japan
[4] Hokkaido Univ, Div Frontier Res, Creat Res Initiat Sousei, Sapporo, Hokkaido 0010021, Japan
[5] Natl Inst Adv Ind Sci & Technol, Res Inst Computat Sci, Tsukuba, Ibaraki 3058568, Japan
关键词
D O I
10.1021/ja064117k
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Hybrid quantum mechanics/molecular mechanics simulations, coupled to the recently introduced metadynamics method, performed on the adenosine triphosphate (ATP) of the bovine Hsc70 ATPase protein, show which specific water molecule of the solvation shell of the Mg2+ metal cation acts as a trigger in the initial phase of the ATP hydrolysis reaction in ATP synthase. Furthermore, we provide a detailed picture of the reaction mechanism, not accessible to experimental probes, that allows us to address two important issues not yet unraveled: (i) the pathway followed by a proton and a hydroxyl anion, produced upon dissociation of a putative catalytic H2O molecule, that is crucial in the selection of the reaction channel leading to the hydrolysis; (ii) the unique and cooperative role of K+ and Mg2+ metal ions in the reaction, acting as cocatalysts and promoting the release of the inorganic phosphate via an exchange of the OH- hydroxyl anion between their respective solvation shells. This is deeply different from the proton wire mechanism evidenced, for instance, in actin and lowers significantly the free energy barrier of the reaction.
引用
收藏
页码:16798 / 16807
页数:10
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