The Role of Key Amino Acids in the Photoactivation Pathway of the Synechocystis Slr1694 BLUF Domain

被引:66
作者
Bonetti, Cosimo [1 ]
Stierl, Manuela [2 ]
Mathes, Tilo [2 ]
van Stokkum, Ivo H. M. [1 ]
Mullen, Katharine M. [1 ]
Cohen-Stuart, Thomas A. [1 ]
van Grondelle, Rienk [1 ]
Hegemann, Peter [2 ]
Kennis, John T. M. [1 ]
机构
[1] Vrije Univ Amsterdam, Fac Sci, Dept Phys & Astron, Biophys Grp, NL-1081 HV Amsterdam, Netherlands
[2] Humboldt Univ, Inst Biol Expt Biophys, D-10115 Berlin, Germany
关键词
INDUCED STRUCTURAL-CHANGES; ULTRAFAST INFRARED-SPECTROSCOPY; QUANTUM-CHEMICAL CALCULATIONS; FLAVIN-BINDING PHOTORECEPTOR; MEDIATED SIGNAL-TRANSDUCTION; RHODOBACTER-SPHAEROIDES; LIGHT RECEPTOR; THERMOSYNECHOCOCCUS-ELONGATUS; TRANSCRIPTIONAL ANTIREPRESSOR; INITIAL-CHARACTERIZATION;
D O I
10.1021/bi901196x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
BLUF (blue light sensing using FAD) domains belong to a novel group of blue light sensing receptor proteins found in microorganisms. We have assessed the role of specific aromatic and polar residues in the Synechocystis Slr1694 BLUF protein by investigating site-directed mutants with substitutions Y8W, W91F, and S28A. The W91F and S28A mutants formed the red-shifted signaling state upon blue light illumination, whereas in the Y8W mutant, signaling state formation was abolished. The W91F mutant shows photoactivation dynamics that involve the successive formation of FAD anionic and neutral semiquinone radicals on a picosecond time scale, followed by radical pair recombination to result in the long-lived signaling state in less than 100 ps. The photoactivation dynamics and quantum yield of signaling state formation were essentially identical to those of wild type, which indicates that only one significant fight-driven electron transfer pathway is available in Slr1694, involving electron transfer from Y8 to FAD without notable contribution of W91. In the S28A mutant, the photoactivation dynamics and quantum yield of signaling state formation as well as dark recovery were essentially the same as in wild type. Thus, S28 does not play ail essential role in the initial hydrogen bond switching reaction in Slr1694 beyond an influence on the absorption spectrum. In the Y8W mutant, two deactivation branches upon excitation were identified: the first involves a neutral semiquinone FADH(center dot) that was formed in similar to 1 ps and recombines in 10 ps and is tentatively assigned to a FADH(center dot)-W8(center dot) radical pair. The second deactivation branch forms FADH(center dot) in 8 ps and evolves to FAD(center dot-) in 200 ps, which recombines to the ground state In about 4 ns. In the latter branch, W8 is tentatively assigned as the FAD redox partner as well. Overall, the results are consistent with a photoactivation mechanism for BLUF domains where signaling state formation proceeds via light-driven electron and proton transfer front Y8 to FAD, followed by a hydrogen bond rearrangement and radical pair recombination.
引用
收藏
页码:11458 / 11469
页数:12
相关论文
共 62 条
[1]   Structure of a novel photoreceptor, the BLUF domain of AppA from Rhodobacter sphaeroides [J].
Anderson, S ;
Dragnea, V ;
Masuda, S ;
Ybe, J ;
Moffat, K ;
Bauer, C .
BIOCHEMISTRY, 2005, 44 (22) :7998-8005
[2]   Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase [J].
Barends, Thomas R. M. ;
Hartmann, Elisabeth ;
Griese, Julia J. ;
Beitlich, Thorsten ;
Kirienko, Natalia V. ;
Ryjenkov, Dmitri A. ;
Reinstein, Jochen ;
Shoeman, Robert L. ;
Gomelsky, Mark ;
Schlichting, Ilme .
NATURE, 2009, 459 (7249) :1015-U150
[3]   Ultrafast transient absorption spectroscopy: principles and application to photosynthetic systems [J].
Berera, Rudi ;
van Grondelle, Rienk ;
Kennis, John T. M. .
PHOTOSYNTHESIS RESEARCH, 2009, 101 (2-3) :105-118
[4]   Hydrogen Bond Switching among Flavin and Amino Acid Side Chains in the BLUF Photoreceptor Observed by Ultrafast Infrared Spectroscopy [J].
Bonetti, Cosimo ;
Mathes, Tilo ;
van Stokkum, Ivo H. M. ;
Mullen, Katharine M. ;
Groot, Marie-Louise ;
van Grondelle, Rienk ;
Hegemann, Peter ;
Kennis, John T. M. .
BIOPHYSICAL JOURNAL, 2008, 95 (10) :4790-4802
[5]   pH dependence of the photocycle kinetics of the E46Q mutant of photoactive yellow protein:: Protonation equilibrium between I1 and I2 intermediates, chromophore deprotonation by hydroxyl uptake, and protonation relaxation of the dark state [J].
Borucki, B ;
Otto, H ;
Joshi, CP ;
Gasperi, C ;
Cusanovich, MA ;
Devanathan, S ;
Tollin, G ;
Heyn, MP .
BIOCHEMISTRY, 2003, 42 (29) :8780-8790
[6]   Molecular models predict light-induced glutamine tautomerization in BLUF photoreceptors [J].
Domratcheva, Tatiana ;
Grigorenko, Bella L. ;
Schlichting, Ilme ;
Nemukhin, Alexander V. .
BIOPHYSICAL JOURNAL, 2008, 94 (10) :3872-3879
[7]   Time-resolved spectroscopic studies of the AppA blue-light receptor BLUF domain from Rhodobacter sphaeroides [J].
Dragnea, V ;
Waegele, M ;
Balascuta, S ;
Bauer, C ;
Dragnea, B .
BIOCHEMISTRY, 2005, 44 (49) :15978-15985
[8]   Photocycle of the flavin-binding photoreceptor AppA, a bacterial transcriptional antirepressor of photosynthesis genes [J].
Gauden, M ;
Yeremenko, S ;
Laan, W ;
van Stokkum, IHM ;
Ihalainen, JA ;
van Grondelle, R ;
Hellingwerf, KJ ;
Kennis, JTM .
BIOCHEMISTRY, 2005, 44 (10) :3653-3662
[9]   On the role of aromatic side chains in the photoactivation of BLUF domains [J].
Gauden, Magdalena ;
Grinstead, Jeffrey S. ;
Laan, Wouter ;
van Stokkum, Ivo H. M. ;
Avila-Perez, Marcela ;
Toh, K. C. ;
Boelens, Rolf ;
Kaptein, Robert ;
van Grondelle, Rienk ;
Hellingwerf, Klaas J. ;
Kennis, John T. M. .
BIOCHEMISTRY, 2007, 46 (25) :7405-7415
[10]   Hydrogen-bond switching through a radical pair mechanism in a flavin-binding photoreceptor [J].
Gauden, Magdalena ;
van Stokkum, Ivo H. M. ;
Key, Jason M. ;
Luehrs, Daniel Ch. ;
Van Grondelle, Rienk ;
Hegemann, Peter ;
Kennis, John T. M. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (29) :10895-10900