A new multitest correction (SGoF) that increases its statistical power when increasing the number of tests

被引:139
作者
Carvajal-Rodriguez, Antonio [1 ]
de Una-Alvarez, Jacobo [2 ]
Rolan-Alvarez, Emilio [1 ]
机构
[1] Univ Vigo, Fac Biol, Dept Bioquim Genet & Inmunol, Vigo 36310, Spain
[2] Univ Vigo, Fac Ciencias Econ & Empresariales, Dept Estadist & Invest Operat, Vigo 36310, Spain
来源
BMC BIOINFORMATICS | 2009年 / 10卷
关键词
FALSE DISCOVERY RATE; MICROARRAY; GENES; HYPOTHESES; PROPORTION; GENOMICS; OMICS;
D O I
10.1186/1471-2105-10-209
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Background: The detection of true significant cases under multiple testing is becoming a fundamental issue when analyzing high-dimensional biological data. Unfortunately, known multitest adjustments reduce their statistical power as the number of tests increase. We propose a new multitest adjustment, based on a sequential goodness of fit metatest (SGoF), which increases its statistical power with the number of tests. The method is compared with Bonferroni and FDR-based alternatives by simulating a multitest context via two different kinds of tests: 1) one-sample t-test, and 2) homogeneity G-test. Results: It is shown that SGoF behaves especially well with small sample sizes when 1) the alternative hypothesis is weakly to moderately deviated from the null model, 2) there are widespread effects through the family of tests, and 3) the number of tests is large. Conclusion: Therefore, SGoF should become an important tool for multitest adjustment when working with high-dimensional biological data.
引用
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页数:14
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