IDENTIX, a software to test for relatedness in a population using permutation methods

被引:164
作者
Belkhir, K
Castric, V
Bonhomme, F
机构
[1] Univ Montpellier 2, Lab Genome, CNRS UMR 5000, F-34095 Montpellier 5, France
[2] Univ Laval, Dept Biol, Ste Foy, PQ G1K 7P4, Canada
来源
MOLECULAR ECOLOGY NOTES | 2002年 / 2卷 / 04期
关键词
bootstrap; computer program; jackknife; natural populations; permutation test; relatedness;
D O I
10.1046/j.1471-8286.2002.00273.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The computer program IDENTIX estimates relatedness in natural populations using multilocus genotypic data. Queller & Goodnight's (1989) and Lynch & Ritland's (1999) estimators of pairwise relatedness are implemented, as well as the identity index of Mathieu et al. (1990). Estimates of the confidence intervals around these pairwise values are also provided. The null hypothesis of no relatedness (multilocus genotypes are independent draws from a panmictic population) is tested using a permutation method that compares the observed distribution of the moments of pairwise relatedness coefficients to that expected in unstructured population.
引用
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页码:611 / 614
页数:4
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