Structure and hydration of membranes embedded with voltage-sensing domains

被引:170
作者
Krepkiy, Dmitriy [10 ]
Mihailescu, Mihaela [1 ,2 ,7 ]
Freites, J. Alfredo [1 ,2 ,3 ,4 ]
Schow, Eric V. [5 ,6 ]
Worcester, David L. [1 ,2 ,7 ,8 ]
Gawrisch, Klaus [9 ]
Tobias, Douglas J. [3 ,4 ]
White, Stephen H. [1 ,2 ,7 ]
Swartz, Kenton J. [10 ]
机构
[1] Univ Calif Irvine, Dept Physiol & Biophys, Irvine, CA 92697 USA
[2] Univ Calif Irvine, Ctr Biomembrane Syst, Irvine, CA 92697 USA
[3] Univ Calif Irvine, Dept Chem, Irvine, CA 92697 USA
[4] Univ Calif Irvine, Inst Surface & Interface Sci, Irvine, CA 92697 USA
[5] Univ Calif Irvine, Dept Phys & Astron, Irvine, CA 92697 USA
[6] Univ Calif Irvine, Inst Genom & Bioinformat, Irvine, CA 92697 USA
[7] NIST, NIST Ctr Neutron Res, Gaithersburg, MD 20899 USA
[8] Univ Missouri, Div Biol, Columbia, MO 65211 USA
[9] NIAAA, Lab Membrane Biochem & Biophys, NIH, Bethesda, MD 20892 USA
[10] NINDS, Mol Physiol & Biophys Sect, Porter Neurosci Res Ctr, NIH, Bethesda, MD 20892 USA
基金
美国国家科学基金会;
关键词
DEPENDENT K+ CHANNEL; MOLECULAR-DYNAMICS SIMULATIONS; NEUTRON-DIFFRACTION DATA; FOCUSED ELECTRIC-FIELD; PARTICLE MESH EWALD; POTASSIUM CHANNEL; GATING-CHARGE; X-RAY; LIPID-MEMBRANE; FUNCTIONAL RECONSTITUTION;
D O I
10.1038/nature08542
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
070301 [无机化学]; 070403 [天体物理学]; 070507 [自然资源与国土空间规划学]; 090105 [作物生产系统与生态工程];
摘要
Despite the growing number of atomic-resolution membrane protein structures, direct structural information about proteins in their native membrane environment is scarce. This problem is particularly relevant in the case of the highly charged S1-S4 voltage-sensing domains responsible for nerve impulses, where interactions with the lipid bilayer are critical for the function of voltage-activated ion channels. Here we use neutron diffraction, solid-state nuclear magnetic resonance (NMR) spectroscopy and molecular dynamics simulations to investigate the structure and hydration of bilayer membranes containing S1-S4 voltage-sensing domains. Our results show that voltage sensors adopt transmembrane orientations and cause a modest reshaping of the surrounding lipid bilayer, and that water molecules intimately interact with the protein within the membrane. These structural findings indicate that voltage sensors have evolved to interact with the lipid membrane while keeping energetic and structural perturbations to a minimum, and that water penetrates the membrane, to hydrate charged residues and shape the transmembrane electric field.
引用
收藏
页码:473 / U168
页数:10
相关论文
共 81 条
[1]
EXTENSION OF THE PARALLAX ANALYSIS OF MEMBRANE PENETRATION DEPTH TO THE POLAR-REGION OF MODEL MEMBRANES - USE OF FLUORESCENCE QUENCHING BY A SPIN-LABEL ATTACHED TO THE PHOSPHOLIPID POLAR HEADGROUP [J].
ABRAMS, FS ;
LONDON, E .
BIOCHEMISTRY, 1993, 32 (40) :10826-10831
[2]
Structural Rearrangements of Membrane Proteins Probed by Water-Edited Solid-State NMR Spectroscopy [J].
Ader, Christian ;
Schneider, Robert ;
Seidel, Karsten ;
Etzkorn, Manuel ;
Becker, Stefan ;
Baldus, Marc .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2009, 131 (01) :170-176
[3]
Contribution of the S4 segment to gating charge in the Shaker K+ channel [J].
Aggarwal, SK ;
MacKinnon, R .
NEURON, 1996, 16 (06) :1169-1177
[4]
Focused electric field across the voltage sensor of potassium channels [J].
Ahern, CA ;
Horn, R .
NEURON, 2005, 48 (01) :25-29
[5]
Portability of paddle motif function and pharmacology in voltage sensors [J].
Alabi, AbdulRasheed A. ;
Bahamonde, Maria Isabel ;
Jung, Hoi Jong ;
Kim, Jae Il ;
Swartz, Kenton J. .
NATURE, 2007, 450 (7168) :370-+
[6]
A fluorometric approach to local electric field measurements in a voltage-gated ion channel [J].
Asamoah, OK ;
Wuskell, JP ;
Loew, LM ;
Bezanilla, F .
NEURON, 2003, 37 (01) :85-97
[7]
Experimental validation of molecular dynamics simulations of lipid bilayers:: A new approach [J].
Benz, RW ;
Castro-Román, F ;
Tobias, DJ ;
White, SH .
BIOPHYSICAL JOURNAL, 2005, 88 (02) :805-817
[8]
BLASIE JK, 1976, BROOKHAVEN SYM BIOL, pR58
[9]
CHARMM: The Biomolecular Simulation Program [J].
Brooks, B. R. ;
Brooks, C. L., III ;
Mackerell, A. D., Jr. ;
Nilsson, L. ;
Petrella, R. J. ;
Roux, B. ;
Won, Y. ;
Archontis, G. ;
Bartels, C. ;
Boresch, S. ;
Caflisch, A. ;
Caves, L. ;
Cui, Q. ;
Dinner, A. R. ;
Feig, M. ;
Fischer, S. ;
Gao, J. ;
Hodoscek, M. ;
Im, W. ;
Kuczera, K. ;
Lazaridis, T. ;
Ma, J. ;
Ovchinnikov, V. ;
Paci, E. ;
Pastor, R. W. ;
Post, C. B. ;
Pu, J. Z. ;
Schaefer, M. ;
Tidor, B. ;
Venable, R. M. ;
Woodcock, H. L. ;
Wu, X. ;
Yang, W. ;
York, D. M. ;
Karplus, M. .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2009, 30 (10) :1545-1614
[10]
Structural dynamics of an isolated voltage-sensor domain in a lipid bilayer [J].
Chakrapani, Sudha ;
Cuello, Luis G. ;
Cortes, D. Marien ;
Perozo, Eduardo .
STRUCTURE, 2008, 16 (03) :398-409