The three-dimensional structure of an eukaryotic glutamine synthetase:: Functional implications of its oligomeric structure

被引:48
作者
Llorca, Oscar
Betti, Marco
Gonzalez, Jose M.
Valencia, Alfonso
Marquez, Antonio J.
Valpuesta, Jose M.
机构
[1] CSIC, Ctr Nacl Biotecnol, E-28049 Madrid, Spain
[2] Univ Seville, Fac Quim, Dept Bioquim Vegetal & Biol Mol, E-41071 Seville, Spain
[3] CSIC, Ctr Invest Biol, E-28040 Madrid, Spain
关键词
glutamine synthetase; electron microscopy; oligomerization; domain swapping;
D O I
10.1016/j.jsb.2006.06.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The structure of the prokaryotic glutamine synthetases type I (GS-I), key enzymes in nitrogen metabolism, was determined several years ago by X-ray diffraction, and consists of a double hexameric ring. The structure of the eukaryotic GS from the plant Phaseolus vulgaris (Glutamine synthetase type II; GS-II) has now been determined at low-resolution using electron microscopy and image processing, and consists of an octamer composed of two tetramers placed back-to-back and rotated 90 degrees with respect to each other. The oligomeric structure possesses a twofold symmetry, very suggestive of each tetramer being composed of two dimers. This is reinforced by the fact that dimers are isolated as a stable albeit non-functional species during the purification procedure. Given the fact that the active site of all types of GS is formed by highly conserved residues located in the interface of two interacting monomers, the geometry of the reconstructed tetramer suggests that it only contains two functional active sites, i.e., an active site per dimer. This is supported by biochemical data, which reveal that while the octamer binds eight ATP molecules, it only binds four molecules of the transition state analogue and GS inhibitor methionine-(S)-sulfoximine-P (MetSox-P). All this suggests for the GS-II enzyme an oligomeric structure containing four active sites and four possible regulatory sites, which might point to a complex regulatory behavior. (c) 2006 Elsevier Inc. All rights reserved.
引用
收藏
页码:469 / 479
页数:11
相关论文
共 46 条
[1]   Structure prediction and active site analysis of the metal binding determinants γ-glutamyleysteine synthetase [J].
Abbott, JJ ;
Pei, JM ;
Ford, JL ;
Qi, Y ;
Grishin, VN ;
Phillips, MA ;
Grishin, NV .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (45) :42099-42107
[2]   NOVEL SUBUNIT SUBUNIT INTERACTIONS IN THE STRUCTURE OF GLUTAMINE-SYNTHETASE [J].
ALMASSY, RJ ;
JANSON, CA ;
HAMLIN, R ;
XUONG, NH ;
EISENBERG, D .
NATURE, 1986, 323 (6086) :304-309
[3]   ATP binding to purified homopolymeric plant glutamine synthetase studied by isothermal titration calorimetry [J].
Betti, M ;
Márquez, AJ ;
Yanes, C ;
Maestre, A .
THERMOCHIMICA ACTA, 2002, 394 (1-2) :63-71
[4]   Glutamine synthetase isolated from human brain:: Octameric structure and homology of partial primary structure with human liver glutamine synthetase [J].
Boksha, IS ;
Schönfeld, HJ ;
Langen, H ;
Müller, F ;
Tereshkina, EB ;
Burbaeva, GS .
BIOCHEMISTRY-MOSCOW, 2002, 67 (09) :1012-1020
[5]   Functional importance of Asp56 from the α-polypeptide of Phaseolus vulgaris glutamine synthetase -: An essential residue for transferase but not for biosynthetic enzyme activity [J].
Clemente, MT ;
Márquez, AJ .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1999, 264 (02) :453-460
[6]   ASSOCIATION DISSOCIATION OF MAMMALIAN BRAIN GLUTAMINE-SYNTHETASE - EFFECTS OF METAL-IONS AND OTHER LIGANDS [J].
DENMAN, RB ;
WEDLER, FC .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1984, 232 (02) :427-440
[7]   SOME EVOLUTIONARY RELATIONSHIPS OF THE PRIMARY BIOLOGICAL CATALYSTS GLUTAMINE-SYNTHETASE AND RUBISCO [J].
EISENBERG, D ;
ALMASSY, RJ ;
JANSON, CA ;
CHAPMAN, MS ;
SUH, SW ;
CASCIO, D ;
SMITH, WW .
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 1987, 52 :483-490
[8]   Structure-function relationships of glutamine synthetases [J].
Eisenberg, D ;
Gill, HS ;
Pfluegl, GMU ;
Rotstein, SH .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 2000, 1477 (1-2) :122-145
[9]   CYSTEINE RESIDUES AT THE ACTIVE-SITE OF GLUTAMINE-SYNTHETASE FROM SPINACH LEAVES [J].
ERICSON, MC ;
BRUNN, SA .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1985, 133 (02) :527-531
[10]   The crystal structure of phosphinothricin in the active site of glutamine synthetase illuminates the mechanism of enzymatic inhibition [J].
Gill, HS ;
Eisenberg, D .
BIOCHEMISTRY, 2001, 40 (07) :1903-1912