Proteomic analysis of log to stationary growth phase Lactobacillus plantarum cells and a 2-DE database

被引:90
作者
Cohen, David P. A.
Renes, Johan
Bouwman, Freek G.
Zoetendal, Erwin G.
Mariman, Edwin
de Vos, Willem M.
Vaughan, Elaine E.
机构
[1] Univ Wageningen & Res Ctr, Microbiol Lab, NL-6703 CT Wageningen, Netherlands
[2] Maastricht Univ, Dept Human Biol, Maastricht Prote Ctr, Nutr & Toxicol Res Inst Maastricht, Maastricht, Netherlands
关键词
2-DE; differential production; growth phases; Lactobacillus plantarum;
D O I
10.1002/pmic.200600361
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Lactobacillus plantarum is part of the natural microbiota of many food fermentations as well as the human gastro-intestinal tract. The cytosolic fraction of the proteome of L. plantarum WCFS1, whose genome has been sequenced, was studied. 2-DE was used to investigate the proteins from the cytosolic fraction isolated from mid- and late-log, early- and late-stationary phase cells to generate reference maps of different growth conditions offering more knowledge of the metabolic behavior of this bacterium. From this fraction, a total of 200 protein spots were identified by MALDI-MS and a proteome production map was constructed to facilitate further studies such as detection of suitable biomarkers for specific growth conditions. More than half (57%) of the identified proteins were predicted to be involved in metabolic pathways of the bacterium. The protein profile changed during the growth of the bacteria such that 29% of the identified proteins involved in anabolic pathways were at least twofold up-regulated throughout the mid- and late-exponential and early-stationary phases. in the late-stationary phase, six proteins involved in stress or with a potential role for survival during starvation were up-regulated significantly.
引用
收藏
页码:6485 / 6493
页数:9
相关论文
共 48 条
  • [1] Ahrné S, 1998, J APPL MICROBIOL, V85, P88
  • [2] Proteome analysis of Neisseria meningitidis serogroup A
    Bernardini, G
    Renzone, G
    Comanducci, M
    Mini, R
    Arena, S
    D'Ambrosio, C
    Bambini, S
    Trabalzini, L
    Grandi, G
    Martelli, P
    Achtman, M
    Scaloni, A
    Ratti, G
    Santucci, A
    [J]. PROTEOMICS, 2004, 4 (10) : 2893 - 2926
  • [3] A combination of protein profiling and isotopomer analysis using matrix-assisted laser desorption/ionization-time of flight mass spectrometry reveals an active metabolism of the extracellular matrix of 3T3-L1 adipocytes
    Bouwman, F
    Renes, J
    Mariman, E
    [J]. PROTEOMICS, 2004, 4 (12) : 3855 - 3863
  • [4] DNA micro-array-based identification of bile-responsive genes in Lactobacillus plantarum
    Bron, PA
    Molenaar, D
    Vos, WM
    Kleerebezem, M
    [J]. JOURNAL OF APPLIED MICROBIOLOGY, 2006, 100 (04) : 728 - 738
  • [5] Identification of Lactobacillus plantarum genes that are induced in the gastrointestinal tract of mice
    Bron, PA
    Grangette, C
    Mercenier, A
    de Vos, WM
    Kleerebezem, M
    [J]. JOURNAL OF BACTERIOLOGY, 2004, 186 (17) : 5721 - 5729
  • [6] Proteomic characterization of the acid tolerance response in Lactococcus lactis MG1363
    Budin-Verneuil, A
    Pichereau, V
    Auffray, Y
    Ehrlich, DS
    Maguin, E
    [J]. PROTEOMICS, 2005, 5 (18) : 4794 - 4807
  • [7] Synthesis/degradation ratio mass spectrometry for measuring relative dynamic protein turnover
    Cargile, BJ
    Bundy, JL
    Grunden, AM
    Stephenson, JL
    [J]. ANALYTICAL CHEMISTRY, 2004, 76 (01) : 86 - 97
  • [8] Comparative genomics and functional roles of the ATP-dependent proteases Lon and Clp during cytosolic protein degradation
    Chandu, D
    Nandi, D
    [J]. RESEARCH IN MICROBIOLOGY, 2004, 155 (09) : 710 - 719
  • [9] A proteome reference map for Vibrio cholerae El Tor
    Coelho, A
    Santos, EDO
    Faria, MLDH
    de Carvalho, DP
    Soares, MR
    von Kruger, WMA
    Bisch, PM
    [J]. PROTEOMICS, 2004, 4 (05) : 1491 - 1504
  • [10] DE MAN J. C., 1960, JOUR APPL BACT, V23, P130, DOI 10.1111/j.1365-2672.1960.tb00188.x