TcruziDB, an integrated database, and the WWW information server for the Trypanosoma cruzi genome project

被引:9
作者
Degrave, W [1 ]
deMiranda, AB [1 ]
Amorim, A [1 ]
Brandao, A [1 ]
Aslett, M [1 ]
Vandeyar, M [1 ]
机构
[1] INST OSWALDO CRUZ,DEPT BIOQUIM & BIOL MOL,BR-21045900 RIO JANEIRO,RJ,BRAZIL
来源
MEMORIAS DO INSTITUTO OSWALDO CRUZ | 1997年 / 92卷 / 06期
关键词
TcruziDB; genome database; Trypanosoma cruzi; clone CL Brener; Parasite Genome Projects; anonymous ftp; listserver;
D O I
10.1590/S0074-02761997000600015
中图分类号
R38 [医学寄生虫学]; Q [生物科学];
学科分类号
07 ; 0710 ; 09 ; 100103 ;
摘要
Data analysis, presentation and distribution is of utmost importance to a genome project. A public domain software, ACeDB, has been chosen as the common basis for parasite genome databases, and a first release of TcruziDB, the Trypanosoma cruzi genome database, is available by ftp from ftp.// iris.dbbm.fiocruz.br/pub/genomedb/TcruziDB as well as versions of the software for different operating systems (ftp://iris.dbbm.fiocruz.br/pub/unixsoft/). Moreover data originated fi-om the project are available from the WWW sewer at http://www.dbbm.fiocruz.br. It contains biological and parasitological data on CL Brener, its karyotype, all available T. cruzi sequences from Genbank, data on the EST-sequencing project and on available libraries, a T. cruzi codon table and a listing of activities and participating groups in the genome project, as well as meeting reports. T. cruzi discussion lists (tcruzi-l@iris.dbbm.fiocruz.br and tcgenics@iris.dbbm.fiocruz.br) are being maintained for communication and to promote collaboration in the genome project.
引用
收藏
页码:805 / 809
页数:5
相关论文
共 2 条
[1]  
DURBIN R, 1991, C ELEGANS DATABASE
[2]  
Zingales B, 1997, PARASITOL TODAY, V13, P16