Minisateilites: mutability and genome architecture

被引:151
作者
Vergnaud, G [1 ]
Denoeud, F
机构
[1] Univ Paris 11, Inst Genet & Microbiol, F-91405 Orsay, France
[2] Ctr Etud Bouchet, F-91710 Vert Le Petit, France
关键词
D O I
10.1101/gr.10.7.899
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Minisatellites have been found in association with important features of human genome biology such as gene regulation, chromosomal fragile sites, and imprinting. Our knowledge of minisatellite biology has greatly increased in the past 10 years owing to the identification and careful analysis of human hypermutable minisatellites, experimental models in yeast, and recent in vitro studies of minisatellite recombination properties. In parallel, minisatellites have been put forward as potential biomarkers for the monitoring of genotoxic agents such as ionizing radiation. We summarize and discuss recent observations on minisatellites. In addition we take advantage of recent whole chromosome sequence data releases to provide a unifying view which may facilitate the annotation of tandem repeat sequences.
引用
收藏
页码:899 / 907
页数:9
相关论文
共 53 条
[1]   Analysis of distribution in the human, pig, and rat genomes points toward a general subtelomeric origin of minisatellite structures [J].
Amarger, V ;
Gauguier, D ;
Yerle, M ;
Apiou, F ;
Pinton, P ;
Giraudeau, F ;
Monfouilloux, S ;
Lathrop, M ;
Dutrillaux, B ;
Buard, J ;
Vergnaud, G .
GENOMICS, 1998, 52 (01) :62-71
[2]   Meiotic interallelic conversion at the human minisatellite MS32 in yeast triggers recombination in several chromatids [J].
Appelgren, H ;
Cederberg, H ;
Rannug, U .
GENE, 1999, 239 (01) :29-38
[3]   Mutations at the human minisatellite MS32 integrated in yeast occur with high frequency in meiosis and involve complex recombination events [J].
Appelgren, H ;
Cederberg, H ;
Rannug, U .
MOLECULAR AND GENERAL GENETICS, 1997, 256 (01) :7-17
[4]  
Appelgren H, 1999, ENVIRON MOL MUTAGEN, V34, P285, DOI 10.1002/(SICI)1098-2280(1999)34:4<285::AID-EM9>3.0.CO
[5]  
2-5
[6]   SYSTEMATIC CLONING OF HUMAN MINISATELLITES FROM ORDERED ARRAY CHAROMID LIBRARIES [J].
ARMOUR, JAL ;
POVEY, S ;
JEREMIAH, S ;
JEFFREYS, AJ .
GENOMICS, 1990, 8 (03) :501-512
[7]  
ASHLEY T, 1994, HUM GENET, V94, P587, DOI 10.1007/BF00206950
[8]   Crossover breakpoint mapping identifies a subtelomeric hotspot for male meiotic recombination [J].
Badge, RM ;
Yardley, J ;
Jeffreys, AJ ;
Armour, JAL .
HUMAN MOLECULAR GENETICS, 2000, 9 (08) :1239-1244
[9]   Tandem repeats finder: a program to analyze DNA sequences [J].
Benson, G .
NUCLEIC ACIDS RESEARCH, 1999, 27 (02) :573-580
[10]   An atypical topoisomerase II from archaea with implications for meiotic recombination [J].
Bergerat, A ;
deMassy, B ;
Gadelle, D ;
Varoutas, PC ;
Nicolas, A ;
Forterre, P .
NATURE, 1997, 386 (6623) :414-417