Fluctuation and correlation in crystalline lysozyme

被引:7
作者
Hery, S
Genest, D
Smith, JC
机构
[1] CEA SACLAY,DBCM,SECT BIOPHYS PROT & MEMBRANES,F-91191 GIF SUR YVETTE,FRANCE
[2] CNRS,CTR BIOPHYS MOL,F-45071 ORLEANS 02,FRANCE
来源
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES | 1997年 / 37卷 / 06期
关键词
D O I
10.1021/ci970234a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We examine interatomic distance fluctuations and displacement correlations in orthorhombic hen egg-white lysozyme using results from a 1 ns molecular dynamics trajectory of the crystalline unit cell. It is found that locally in the sequence the atoms are both highly correlated and undergo low relative fluctuations. Those nonlocal elements of the structure that undergo low relative fluctuations are located largely within secondary structural elements in the beta domain. The canonical correlation matrices of the four lysozyme molecules in the unit cell are markedly different and have not converged.
引用
收藏
页码:1011 / 1017
页数:7
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