Database on the structure of large ribosomal subunit RNA

被引:27
作者
DeRijk, P [1 ]
VandePeer, Y [1 ]
DeWachter, R [1 ]
机构
[1] UNIV INSTELLING ANTWERP,DEPT BIOCHEM,B-2610 ANTWERP,BELGIUM
关键词
D O I
10.1093/nar/25.1.117
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The latest release of the large ribosomal subunit RNA database contains 429 sequences. All these sequences are aligned, and incorporate secondary structure information. The rRNA WWW Sewer at URL http://rrna.uia.ac.be/ provides researchers with an easily accessible resource to obtain the data in this database in a number of computer-readable formats. A new query interface has been added to the server. If necessary, the data can also be obtained by anonymous ftp from the same site.
引用
收藏
页码:117 / 122
页数:6
相关论文
共 22 条
[1]  
Ainsworth GC, 1973, FUNGI ADV TREATISE
[2]   SPECIES-SPECIFIC DETECTION OF CAMPYLOBACTERS IMPORTANT IN VETERINARY-MEDICINE BY PCR AMPLIFICATION OF 23S RDNA AREAS [J].
BASTYNS, K ;
CHAPELLE, S ;
VANDAMME, P ;
GOOSSENS, H ;
DEWACHTER, R .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1995, 17 (04) :563-568
[3]   IDENTIFICATION OF LACTOCOCCI AND ENTEROCOCCI BY COLONY HYBRIDIZATION WITH 23S RIBOSOMAL-RNA-TARGETED OLIGONUCLEOTIDE PROBES [J].
BETZL, D ;
LUDWIG, W ;
SCHLEIFER, KH .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1990, 56 (09) :2927-2929
[4]  
BRIMACOMBE R, 1985, BIOCHEM J, V229, P1
[5]  
Brusca R.C., 1990, Invertebrates
[6]  
Cronquist A, 1971, INTRO BOT, Vsecond
[7]  
DERIJK P, 1993, COMPUT APPL BIOSCI, V9, P735
[8]   Database on the structure of large ribosomal subunit RNA [J].
DeRijk, P ;
VandePeer, Y ;
DeWachter, R .
NUCLEIC ACIDS RESEARCH, 1996, 24 (01) :92-97
[9]   A COMPILATION OF LARGE SUBUNIT (23S-LIKE AND 23S-LIKE) RIBOSOMAL-RNA STRUCTURES - 1993 [J].
GUTELL, RR ;
GRAY, MW ;
SCHNARE, MN .
NUCLEIC ACIDS RESEARCH, 1993, 21 (13) :3055-3074
[10]   EVOLUTIONARY RELATIONSHIPS AMONGST ARCHAEBACTERIA - A COMPARATIVE-STUDY OF 23 S-RIBOSOMAL RNAS OF A SULFUR-DEPENDENT EXTREME THERMOPHILE, AN EXTREME HALOPHILE AND A THERMOPHILIC METHANOGEN [J].
LEFFERS, H ;
KJEMS, J ;
OSTERGAARD, L ;
LARSEN, N ;
GARRETT, RA .
JOURNAL OF MOLECULAR BIOLOGY, 1987, 195 (01) :43-61