Advances in time-resolved approaches to characterize the dynamical nature of enzymatic catalysis

被引:75
作者
Callender, Robert
Dyer, R. Brian
机构
[1] Albert Einstein Coll Med, Dept Biochem, Bronx, NY 10461 USA
[2] Los Alamos Natl Lab, Div Chem, Los Alamos, NM 87545 USA
关键词
D O I
10.1021/cr050284b
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Time-resolved studies of enzymes date more than 100 years ago with the success of the Michaelis-Menton description of enzyme kinetics. For more than a century, approach development has been crucial toward the goal of a determination of the time evolution of atomic structure. To date, proven techniques to study enzymes include laser-induced temperature-jump (T-jump), time-resolved spectroscopic probes, laser-induced pH-Jump and rapid mixing methods. One way or another, these techniques have been applied to the study of triosephosphate isomerase (TIM), lactate dehydrogenase (LDH)-laser-induced T-Jump studies, hydride transfer in transhydrogenase and hydrolysis reaction of the Ras protein.
引用
收藏
页码:3031 / 3042
页数:12
相关论文
共 96 条
[1]   Fast events in protein folding:: Structural volume changes accompanying the early events in the N→I transition of apomyoglobin induced by ultrafast pH jump [J].
Abbruzzetti, S ;
Crema, E ;
Masino, L ;
Vecli, A ;
Viappiani, C ;
Small, JR ;
Libertini, LJ ;
Small, EW .
BIOPHYSICAL JOURNAL, 2000, 78 (01) :405-415
[2]   Monitoring the GAP catalyzed H-Ras GTPase reaction at atomic resolution in real time [J].
Allin, C ;
Ahmadian, MR ;
Wittinghofer, A ;
Gerwert, K .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (14) :7754-7759
[3]   Ras catalyzes CTP hydrolysis by shifting negative charges from γ- to β-phosphate as revealed by time-resolved FTIR difference spectroscopy [J].
Allin, C ;
Gerwert, K .
BIOCHEMISTRY, 2001, 40 (10) :3037-3046
[4]   DIRECT OBSERVATIONS OF LIGAND DYNAMICS IN HEMOGLOBIN BY SUBPICOSECOND INFRARED-SPECTROSCOPY [J].
ANFINRUD, PA ;
HAN, C ;
HOCHSTRASSER, RM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (21) :8387-8391
[5]   Computational and theoretical methods to explore the relation between enzyme dynamics and catalysis [J].
Antoniou, Dimitri ;
Basner, Jodi ;
Nunez, Sara ;
Schwartz, Steven D. .
CHEMICAL REVIEWS, 2006, 106 (08) :3170-3187
[6]   The first events in photosynthesis:: Electronic coupling and energy transfer dynamics in the photosynthetic reaction center from Rhodobacter sphaeroides [J].
Arnett, DC ;
Moser, CC ;
Dutton, PL ;
Scherer, NF .
JOURNAL OF PHYSICAL CHEMISTRY B, 1999, 103 (11) :2014-2032
[7]   Observation of distinct nanosecond and microsecond protein folding events [J].
Ballew, RM ;
Sabelko, J ;
Gruebele, M .
NATURE STRUCTURAL BIOLOGY, 1996, 3 (11) :923-926
[8]   STIMULATED RAMAN EFFECT - A NEW SOURCE OF LASER TEMPERATURE-JUMP HEATING [J].
BEITZ, JV ;
FLYNN, GW ;
TURNER, DH ;
SUTIN, N .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1970, 92 (13) :4130-&
[9]  
Bernasconi C.F., 1976, Relaxation Kinetics
[10]   EVOLUTIONARY OPTIMIZATION OF THE CATALYTIC EFFECTIVENESS OF AN ENZYME [J].
BURBAUM, JJ ;
RAINES, RT ;
ALBERY, WJ ;
KNOWLES, JR .
BIOCHEMISTRY, 1989, 28 (24) :9293-9305