Probes of a role for remote binding interactions on hydrogen tunneling in the horse liver alcohol dehydrogenase reaction

被引:27
作者
Chin, JK
Klinman, JP [1 ]
机构
[1] Univ Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA
关键词
D O I
10.1021/bi9920331
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A tunneling contribution to hydride transfer has been demonstrated previously in the oxidation of benzyl alcohol catalyzed by an active-site mutant (F93W) of horse liver alcohol dehydrogenase (LADH) [Bahnson, B. J., et al. (1993) Biochemistry 32, 5503-507]. Mutation of a residue that lies directly behind the nicotinamide ring of the bound cofactor has further shown that side-chain bulk can contribute to catalytic efficiency and tunneling in a correlated fashion [Bahnson, B. J., et al. (1997) Proc. Natl Acad. Scr, U.S.A. 94, 12797-12802]. Second site mutations of F93W have now been made at. positions more remote from the active site. In particular, we have focused on an isoleucine residue that interacts with the adenine moiety of the NAD(+) cofactor, 20 Angstrom from the nicotinamide ring. Replacement of this remote residue with glycine (F93W:I224G), alanine (F93W:I224A), valine (F93W:I224V), and leucine (F93W: I224L,) is concluded to destabilize the binding of NAD(+). All double mutants exhibited a KM for NAD(+) that: is 2-25 times higher than that for the F93W enzyme. However, neither the catalytic efficiency for turnover of benzyl alcohol [k(cat)/K-M(benzyl (alcohol))] nor the relationship between the secondary [k(H)/k(T) and k(D)/k(T) isotope effects for benzyl alcohol oxidation was significantly affected. The lack-of differences observed in the isotope effects indicates that these mutations have little effect on the extent of hydrogen tunneling in the reaction. The complete removal of the side chain at position 224 in the F93W:I224G enzyme resulted in a less than 5% decrease in the ratio of the secondary isotope effects, maintaining the ratio above the semiclassical limit for the indication of tunneling in the reaction. By contrast, K-i for NAD(+) increased 60-fold for this mutant. The results obtained with F93W:I224G are consistent with remote interactions that affect the association and binding of cofactor in a reactive conformation. However, once this conformation is achieved, hydride transfer and its tunneling component proceed as with the single F93W mutant enzyme, uninfluenced by the remote mutation. Replacement of other side chains, with alpha-carbon positions from about 8 to over 20 Angstrom from the C4 position of the nicotinamide ring, demonstrated a similar insensitivity of k(cat)/K-M(benzyl (alcohol)) to protein modification. Comparison to earlier studies with active-site mutants of LADH implicates a role for proximal, but not distal, side chains in the modulation of hydrogen tunneling for this enzyme.
引用
收藏
页码:1278 / 1284
页数:7
相关论文
共 33 条
[1]   Large kinetic isotope effects in enzymatic proton transfer and the role of substrate oscillations [J].
Antoniou, D ;
Schwartz, SD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (23) :12360-12365
[2]   DYNAMICS OF LIGAND-BINDING TO MYOGLOBIN [J].
AUSTIN, RH ;
BEESON, KW ;
EISENSTEIN, L ;
FRAUENFELDER, H ;
GUNSALUS, IC .
BIOCHEMISTRY, 1975, 14 (24) :5355-5373
[3]   A link between protein structure and enzyme catalyzed hydrogen tunneling [J].
Bahnson, BJ ;
Colby, TD ;
Chin, JK ;
Goldstein, BM ;
Klinman, JP .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (24) :12797-12802
[4]   UNMASKING OF HYDROGEN TUNNELING IN THE HORSE LIVER ALCOHOL-DEHYDROGENASE REACTION BY SITE-DIRECTED MUTAGENESIS [J].
BAHNSON, BJ ;
PARK, DH ;
KIM, K ;
PLAPP, BV ;
KLINMAN, JP .
BIOCHEMISTRY, 1993, 32 (21) :5503-5507
[5]   Ground state and transition state contributions to the rates of intramolecular and enzymatic reactions [J].
Bruice, TC ;
Lightstone, FC .
ACCOUNTS OF CHEMICAL RESEARCH, 1999, 32 (02) :127-136
[6]   A FEW AMINO-ACID SUBSTITUTIONS ARE RESPONSIBLE FOR THE HIGHER THERMOSTABILITY OF A NOVEL NAD(+)-DEPENDENT BACILLAR ALCOHOL-DEHYDROGENASE [J].
CANNIO, R ;
ROSSI, M ;
BARTOLUCCI, S .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1994, 222 (02) :345-352
[7]   A perspective on biological catalysis [J].
Cannon, WR ;
Singleton, SF ;
Benkovic, SJ .
NATURE STRUCTURAL BIOLOGY, 1996, 3 (10) :821-833
[8]   HYDROGEN TUNNELING IN ENZYME-REACTIONS [J].
CHA, Y ;
MURRAY, CJ ;
KLINMAN, JP .
SCIENCE, 1989, 243 (4896) :1325-1330
[9]  
CLELAND WW, 1967, ADV ENZYMOL RAMB, V29, P1
[10]   Active site modifications in a double mutant of liver alcohol dehydrogenase: Structural studies of two enzyme-ligand complexes [J].
Colby, TD ;
Bahnson, BJ ;
Chin, JK ;
Klinman, JP ;
Goldstein, BM .
BIOCHEMISTRY, 1998, 37 (26) :9295-9304