Classification of Alzheimer's disease and prediction of mild cognitive impairment-to-Alzheimer's conversion from structural magnetic resource imaging using feature ranking and a genetic algorithm

被引:163
作者
Beheshti, Iman [1 ]
Demirel, Hasan [2 ]
Matsuda, Hiroshi [1 ]
机构
[1] Natl Ctr Neurol & Psychiat, Integrat Brain Imaging Ctr, 4-1-1 Ogawahigashi Cho, Kodaira, Tokyo 1878551, Japan
[2] Eastern Mediterranean Univ, Dept Elect & Elect Engn, Biomed Image Proc Grp, TR-10 Famagusta, Mersin, Turkey
关键词
Alzheimer's disease; Mild cognitive impairment conversion; Feature ranking; Genetic algorithm; COMPUTER-AIDED DIAGNOSIS; VOXEL-BASED MORPHOMETRY; DIFFEOMORPHIC ANATOMIC REGISTRATION; FEATURE-SELECTION; MRI; PATTERNS; DISCRIMINATION; SEGMENTATION; PROGRESSION; DEMENTIA;
D O I
10.1016/j.compbiomed.2017.02.011
中图分类号
Q [生物科学];
学科分类号
090105 [作物生产系统与生态工程];
摘要
We developed a novel computer-aided diagnosis (CAD) system that uses feature-ranking and a genetic algorithm to analyze structural magnetic resonance imaging data; using this system, we can predict conversion of mild cognitive impairment (MCI)-to-Alzheimer's disease (AD) at between one and three years before clinical diagnosis. The CAD system was developed in four stages. First, we used a voxel-based morphometry technique to investigate global and local gray matter (GM) atrophy in an AD group compared with healthy controls (HCs). Regions with significant GM volume reduction were segmented as volumes of interest (VOIs). Second, these VOIs were used to extract voxel values from the respective atrophy regions in AD, HC, stable MCI (sMCI) and progressive MCI (pMCI) patient groups. The voxel values were then extracted into a feature vector. Third, at the feature-selection stage, all features were ranked according to their respective t-test scores and a genetic algorithm designed to find the optimal feature subset. The Fisher criterion was used as part of the objective function in the genetic algorithm. Finally, the classification was carried out using a support vector machine (SVM) with 10-fold cross validation. We evaluated the proposed automatic CAD system by applying it to baseline values from the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset (160 AD, 162 HC, 65 sMCI and 71 pMCI subjects). The experimental results indicated that the proposed system is capable of distinguishing between sMCI and pMCI patients, and would be appropriate for practical use in a clinical setting.
引用
收藏
页码:109 / 119
页数:11
相关论文
共 73 条
[1]
Different multivariate techniques for automated classification of MRI data in Alzheimer's disease and mild cognitive impairment [J].
Aguilar, Carlos ;
Westman, Eric ;
Muehlboeck, J-Sebastian ;
Mecocci, Patrizia ;
Vellas, Bruno ;
Tsolaki, Magda ;
Kloszewska, Iwona ;
Soininen, Hilkka ;
Lovestone, Simon ;
Spenger, Christian ;
Simmons, Andrew ;
Wahlund, Lars-Olof .
PSYCHIATRY RESEARCH-NEUROIMAGING, 2013, 212 (02) :89-98
[2]
An MRI-Derived Definition of MCI-to-AD Conversion for Long-Term, Automatic Prognosis of MCI Patients [J].
Aksu, Yaman ;
Miller, David J. ;
Kesidis, George ;
Bigler, Don C. ;
Yang, Qing X. .
PLOS ONE, 2011, 6 (10)
[3]
Alzheimer's Association, 2015, ALZH DIS DEM
[4]
Alzheimers Association, 2015, Alzheimers Dement, V11, P332
[5]
Partial least squares for discrimination in fMRI data [J].
Andersen, Anders H. ;
Rayens, William S. ;
Liu, Yushu ;
Smith, Charles D. .
MAGNETIC RESONANCE IMAGING, 2012, 20 (03) :446-452
[6]
A fast diffeomorphic image registration algorithm [J].
Ashburner, John .
NEUROIMAGE, 2007, 38 (01) :95-113
[7]
Probability distribution function-based classification of structural MRI for the detection of Alzheimer's disease [J].
Beheshti, I. ;
Demirel, H. .
COMPUTERS IN BIOLOGY AND MEDICINE, 2015, 64 :208-216
[8]
Feature-ranking-based Alzheimer's disease classification from structural MRI [J].
Beheshti, Iman ;
Demirel, Hasan .
MAGNETIC RESONANCE IMAGING, 2016, 34 (03) :252-263
[9]
Classification of Alzheimer's disease subjects from MRI using hippocampal visual features [J].
Ben Ahmed, Olfa ;
Benois-Pineau, Jenny ;
Allard, Michele ;
Ben Amar, Chokri ;
Catheline, Gwenaeelle .
MULTIMEDIA TOOLS AND APPLICATIONS, 2015, 74 (04) :1249-1266
[10]
Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge [J].
Bron, Esther E. ;
Smits, Marion ;
van der Flier, Wiesje M. ;
Vrenken, Hugo ;
Barkhof, Frederik ;
Scheltens, Philip ;
Papma, Janne M. ;
Steketee, Rebecca M. E. ;
Orellana, Carolina Mendez ;
Meijboom, Rozanna ;
Pinto, Madalena ;
Meireles, Joana R. ;
Garrett, Carolina ;
Bastos-Leite, Antonio J. ;
Abdulkadir, Ahmed ;
Ronneberger, Olaf ;
Amoroso, Nicola ;
Bellotti, Roberto ;
Cardenas-Pena, David ;
Alvarez-Meza, Andres M. ;
Dolph, Chester V. ;
Iftekharuddin, Khan M. ;
Eskildsen, Simon F. ;
Coupe, Pierrick ;
Fonov, Vladimir S. ;
Franke, Katja ;
Gaser, Christian ;
Ledig, Christian ;
Guerrero, Ricardo ;
Tong, Tong ;
Gray, Katherine R. ;
Moradi, Elaheh ;
Tohka, Jussi ;
Routier, Alexandre ;
Durrleman, Stanley ;
Sarica, Alessia ;
Di Fatta, Giuseppe ;
Sensi, Francesco ;
Chincarini, Andrea ;
Smith, Garry M. ;
Stoyanov, Zhivko V. ;
Sorensen, Lauge ;
Nielsen, Mads ;
Tangaro, Sabina ;
Inglese, Paolo ;
Wachinger, Christian ;
Reuter, Martin ;
van Swieten, John C. ;
Niessen, Wiro J. ;
Klein, Stefan .
NEUROIMAGE, 2015, 111 :562-579