Ring Strain Energy in the Cyclooctyl System. The Effect of Strain Energy on [3+2] Cycloaddition Reactions with Azides

被引:91
作者
Bach, Robert D. [1 ]
机构
[1] Univ Delaware, Dept Chem & Biochem, Newark, DE 19716 USA
关键词
FREE CLICK CHEMISTRY; TRANS-CYCLOOCTENE; CONFORMATIONAL-ANALYSIS; MOLECULAR ASYMMETRY; RELATIVE REACTIVITY; CHEMICAL-REACTIVITY; DOUBLE-BONDS; ELECTRON; CIS; SUBSTITUTION;
D O I
10.1021/ja8094137
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Ring strain energies (SEs) and enthalpies of hydrogenation (Delta H-hyd) of a series of E- and Z-alkenes, cyclic alkynes and allenes (C-5-C-9) are computed at the G3 level of theory. The SE for cycloheptyne, cyclohexyne, and cyclopentyne are calculated to be 25.4, 40.1, and 48.4 kcal/mol, respectively. The SE for E-cycloheptene and E-cyclohexene are calculated to be 25.2 and 49.3 kcal/mol (G3). The SE of cyclooctyne is 2.0 kcal/mol greater than that of E-cyclooctene (17.9 kcal/mol) but only 7.7 kcal/mol greater than that of cyclooctane. The SE of 3,3-difluorocyclooctyne (DIFO) is predicted to be slightly reduced (Delta SE = 2.6 kcal/mol) relative to the parent cyclooctyne to 17.3 kcal/mol. The SE and Delta H-hyd are correlated with activation barriers for the [3 + 2] cycloaddition of a series of azides to E- and Z-cycloalkenes and alkynes at the G3 level of theory. The energy barrier for the cycloaddition of methyl azide to cyclooctyne is 9.2 kcal/mol lower than addition to 4-octyne and 3.1 kcal/mol lower for reaction with E-cyclooctene. The activation energies for [3 + 2] cycloaddition of benzyl azide and acetamido azide (2HN(C=O)CH2-N-3) to DIFO are 2.3 and 5.3 kcal/mol lower in energy than cycloaddition to cyclooctyne [B3LYP/6-311+G(3df,2p)].
引用
收藏
页码:5233 / 5243
页数:11
相关论文
共 59 条
[1]   A comparative study of bioorthogonal reactions with azides [J].
Agard, Nicholas J. ;
Baskin, Jeremy M. ;
Prescher, Jennifer A. ;
Lo, Anderson ;
Bertozzi, Carolyn R. .
ACS CHEMICAL BIOLOGY, 2006, 1 (10) :644-648
[2]   A strain-promoted [3+2] azide-alkyne cycloaddition for covalent modification of blomolecules in living systems [J].
Agard, NJ ;
Prescher, JA ;
Bertozzi, CR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (46) :15046-15047
[3]  
Alcamí M, 1998, J COMPUT CHEM, V19, P1072, DOI 10.1002/(SICI)1096-987X(19980715)19:9<1072::AID-JCC8>3.0.CO
[4]  
2-N
[5]   ON THE THERMAL-ISOMERIZATION OF TRANS-CYCLOOCTENE TO CIS-CYCLOOCTENE [J].
ANDREWS, UH ;
BALDWIN, JE ;
GRAYSTON, MW .
JOURNAL OF ORGANIC CHEMISTRY, 1982, 47 (02) :287-292
[6]  
Bach R.D., 2006, Chemistry of Peroxides, P1
[7]   The effect of carbonyl substitution on the strain energy of small ring compounds and their six-member ring reference compounds [J].
Bach, RD ;
Dmitrenko, O .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (14) :4598-4611
[8]   STEREOCHEMISTRY OF TRANS-CYCLOOCTENE DERIVATIVES [J].
BACH, RD ;
MAZUR, U ;
LAUDERBA.SK ;
HAMAMA, I .
TETRAHEDRON, 1972, 28 (07) :1955-&
[9]   Strain energy of small ring hydrocarbons. Influence of C-H bond dissociation energies [J].
Bach, RD ;
Dmitrenko, O .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (13) :4444-4452
[10]   The effect of substitutents on the strain energies of small ring compounds [J].
Bach, RD ;
Dmitrenko, O .
JOURNAL OF ORGANIC CHEMISTRY, 2002, 67 (08) :2588-2599