Microfluidic chips for the crystallization of biomacromolecules by counter-diffusion and on-chip crystal X-ray analysis

被引:103
作者
Dhouib, Kaouthar [3 ]
Malek, Chantal Khan [1 ,2 ]
Pfleging, Wilhelm [4 ]
Gauthier-Manuel, Bernard [1 ,2 ]
Duffait, Roland [1 ,2 ]
Thuillier, Gael [1 ,2 ]
Ferrigno, Rosaria [5 ,6 ]
Jacquamet, Lilian [7 ]
Ohana, Jeremy [7 ]
Ferrer, Jean-Luc [7 ]
Theobald-Dietrich, Anne [3 ]
Giege, Richard [3 ]
Lorber, Bernard [3 ]
Sauter, Claude [3 ]
机构
[1] FEMTO ST, FEMTO Innovat, CNRS, UMR 6174, F-25044 Besancon, France
[2] CTMN, F-25044 Besancon, France
[3] Univ Strasbourg, Architecture & React ARN, CNRS, IBMC, F-67084 Strasbourg, France
[4] Forschungszentrum Karlsruhe, Inst Mat Res 1, D-76021 Karlsruhe, Germany
[5] Univ Lyon, Lyon Inst Nanotechnol, INL, CNRS,UMR5270, F-69003 Lyon, France
[6] Univ Lyon 1, F-69622 Villeurbanne, France
[7] Univ Grenoble 1, Grp Synchrotron, Inst Biol Struct, CEA,CNRS, F-38027 Grenoble 1, France
关键词
PROTEIN CRYSTALLIZATION; RAPID FABRICATION; MOLD INSERTS; REPLICATION; COUNTERDIFFUSION; GROWTH; WAVE;
D O I
10.1039/b819362b
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Microfluidic devices were designed to perform on micromoles of biological macromolecules and viruses the search and the optimization of crystallization conditions by counter-diffusion, as well as the on-chip analysis of crystals by X-ray diffraction. Chips composed of microchannels were fabricated in poly-dimethylsiloxane (PDMS), poly-methyl-methacrylate (PMMA) and cyclo-olefin-copolymer (COC) by three distinct methods, namely replica casting, laser ablation and hot embossing. The geometry of the channels was chosen to ensure that crystallization occurs in a convection-free environment. The transparency of the materials is compatible with crystal growth monitoring by optical microscopy. The quality of the protein 3D structures derived from on-chip crystal analysis by X-ray diffraction using a synchrotron radiation was used to identify the most appropriate polymers. Altogether the results demonstrate that for a novel biomolecule. all steps from the initial search of crystallization conditions to X-ray diffraction data collection for 3D structure determination can be performed in a single chip.
引用
收藏
页码:1412 / 1421
页数:10
相关论文
共 45 条
[1]   PHENIX:: building new software for automated crystallographic structure determination [J].
Adams, PD ;
Grosse-Kunstleve, RW ;
Hung, LW ;
Ioerger, TR ;
McCoy, AJ ;
Moriarty, NW ;
Read, RJ ;
Sacchettini, JC ;
Sauter, NK ;
Terwilliger, TC .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 :1948-1954
[2]   Phase knowledge enables rational screens for protein crystallization [J].
Anderson, Megan J. ;
Hansen, Carl L. ;
Quake, Stephen R. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (45) :16746-16751
[3]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[4]   X-ray microfocussing combined with microfluidics for on-chip X-ray scattering measurements [J].
Barrett, R ;
Faucon, M ;
Lopez, J ;
Cristobal, G ;
Destremaut, F ;
Dodge, A ;
Guillot, P ;
Laval, P ;
Masselon, C ;
Salmon, JB .
LAB ON A CHIP, 2006, 6 (04) :494-499
[5]  
BRANDNER JJ, 2006, ADV MICRO NANOSYSTEM, V5, P267
[6]   The PILATUS 1M detector [J].
Broennimann, C ;
Eikenberry, EF ;
Henrich, B ;
Horisberger, R ;
Huelsen, G ;
Pohl, E ;
Schmitt, B ;
Schulze-Briese, C ;
Suzuki, M ;
Tomizaki, T ;
Toyokawa, H ;
Wagner, A .
JOURNAL OF SYNCHROTRON RADIATION, 2006, 13 :120-130
[7]  
Ducruix A., 1999, CRYSTALLIZATION NUCL, VSecond
[8]   Counterdiffusion methods for macromolecular crystallization [J].
García-Ruiz, JM .
MACROMOLECULAR CRYSTALLOGRAPHY, PT C, 2003, 368 :130-+
[9]   A supersaturation wave of protein crystallization [J].
García-Ruiz, JM ;
Otálora, F ;
Novella, ML ;
Gavira, JA ;
Sauter, C ;
Vidal, O .
JOURNAL OF CRYSTAL GROWTH, 2001, 232 (1-4) :149-155
[10]   INVESTIGATIONS ON PROTEIN CRYSTAL-GROWTH BY THE GEL ACUPUNCTURE METHOD [J].
GARCIARUIZ, JM ;
MORENO, A .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1994, 50 :484-490