rtracklayer: an R package for interfacing with genome browsers

被引：504

作者：

Lawrence, Michael ^{[1
]}

Gentleman, Robert ^{[1
]}

Carey, Vincent ^{[2
]}

机构：

[1] Fred Hutchinson Canc Res Ctr, Program Computat Biol, Seattle, WA 98102 USA

[2] Harvard Univ, Channing Lab, Sch Med, Boston, MA 02115 USA

来源：

BIOINFORMATICS | 2009年 / 25卷 / 14期

关键词：

D O I：

10.1093/bioinformatics/btp328

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

The rtracklayer package supports the integration of existing genome browsers with experimental data analyses performed in R. The user may (i) transfer annotation tracks to and from a genome browser and (ii) create and manipulate browser views to focus on a particular set of annotations in a specific genomic region. Currently, the UCSC genome browser is supported.

引用

页码：1841 / 1842

页数：2