Rational Design of Antisense Oligomers to Induce Dystrophin Exon Skipping

被引:34
作者
Mitrpant, Chalermchai [1 ,2 ]
Adams, Abbie M. [1 ]
Meloni, Penny L. [1 ]
Muntoni, Francesco [3 ,4 ]
Fletcher, Sue [1 ]
Wilton, Steve D. [1 ]
机构
[1] Univ Western Australia, Ctr Neuromuscular & Neurol Disorders, QE Med Ctr 2, Nedlands, WA 6009, Australia
[2] Mahidol Univ, Siriraj Hosp, Fac Med, Dept Biochem, Bangkok 10700, Thailand
[3] UCL, Inst Child Hlth, Dept Neurosci, Dubowitz Neuromuscular Ctr, London, England
[4] Great Ormond St Hosp Sick Children, London WC1N 3JH, England
基金
美国国家卫生研究院;
关键词
REGULATORY ELEMENTS; PREMESSENGER RNA; GENE; SEQUENCE; MODEL; RESTORATION; MECHANISMS; TRANSCRIPT; MUTATIONS; ENHANCERS;
D O I
10.1038/mt.2009.49
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Duchenne muscular dystrophy (DMD), one of the most severe neuromuscular disorders of childhood, is caused by the absence of a functional dystrophin. Antisense oligomer (AO) induced exon skipping is being investigated to restore functional dystrophin expression in models of muscular dystrophy and DMD patients. One of the major challenges will be in the development of clinically relevant oligomers and exon skipping strategies to address many different mutations. Various models, including cell-free extracts, cells transfected with artificial constructs, or mice with a human transgene, have been proposed as tools to facilitate oligomer design. Despite strong sequence homology between the human and mouse dystrophin genes, directing an oligomer to the same motifs in both species does not always induce comparable exon skipping. We report substantially different levels of exon skipping induced in normal and dystrophic human myogenic cell lines and propose that animal models or artificial assay systems useful in initial studies may be of limited relevance in designing the most efficient compounds to induce targeted skipping of human dystrophin exons for therapeutic outcomes.
引用
收藏
页码:1418 / 1426
页数:9
相关论文
共 43 条
[1]   Targeted exon skipping as a potential gene correction therapy for Duchenne muscular dystrophy [J].
Aartsma-Rus, A ;
Bremmer-Bout, M ;
Janson, AAM ;
den Dunnen, JT ;
van Ommen, GJB ;
van Deutekom, JCT .
NEUROMUSCULAR DISORDERS, 2002, 12 :S71-S77
[2]   Functional analysis of 114 exon-internal AONs for targeted DMD exon skipping: Indication for steric hindrance of SR protein binding sites [J].
Aartsma-Rus, A ;
De Winter, CL ;
Janson, AAM ;
Kaman, WE ;
Van Ommen, GJB ;
Den Dunnen, JT ;
van Deutekom, JCT .
OLIGONUCLEOTIDES, 2005, 15 (04) :284-297
[3]   Antisense oligonucleotide induced exon skipping and the dystrophin gene transcript: cocktails and chemistries [J].
Adams, Abbie M. ;
Harding, Penny L. ;
Iversen, Patrick L. ;
Coleman, Catherine ;
Fletcher, Sue ;
Wilton, Steve D. .
BMC MOLECULAR BIOLOGY, 2007, 8
[4]   Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors [J].
Bentley, DL .
CURRENT OPINION IN CELL BIOLOGY, 2005, 17 (03) :251-256
[5]   Mechanisms of alternative pre-messenger RNA splicing [J].
Black, DL .
ANNUAL REVIEW OF BIOCHEMISTRY, 2003, 72 :291-336
[6]   Function and genetics of dystrophin and dystrophin-related proteins in muscle [J].
Blake, DJ ;
Weir, A ;
Newey, SE ;
Davies, KE .
PHYSIOLOGICAL REVIEWS, 2002, 82 (02) :291-329
[7]   Targeted exon skipping in transgenic hDMD mice:: A model for direct preclinical screening of human-specific antisense oligonucleotides [J].
Bremmer-Bout, M ;
Aartsma-Rus, A ;
de Meijer, EJ ;
Kaman, WE ;
Janson, AAM ;
Vossen, RHAM ;
van Ommen, GJB ;
den Dunnen, JT ;
van Deutekom, JCT .
MOLECULAR THERAPY, 2004, 10 (02) :232-240
[8]   Listening to silence and understanding nonsense: Exonic mutations that affect splicing [J].
Cartegni, L ;
Chew, SL ;
Krainer, AR .
NATURE REVIEWS GENETICS, 2002, 3 (04) :285-298
[9]   ESEfinder: a web resource to identify exonic splicing enhancers [J].
Cartegni, L ;
Wang, JH ;
Zhu, ZW ;
Zhang, MQ ;
Krainer, AR .
NUCLEIC ACIDS RESEARCH, 2003, 31 (13) :3568-3571
[10]  
Sandre-Giovannoli A, 2006, PROG MOLEC, V44, P199