Sequence-specific alkylation of double-strand human telomere repeat sequence by pyrrole-imidazole polyamides with indole linkers

被引:30
作者
Sasaki, Shunta [1 ]
Bando, Toshikazu [1 ]
Minoshima, Masafumi [1 ]
Shimizu, Tatsuhiko [1 ]
Shinohara, Ken-ichi [1 ]
Takaoka, Toshiyasu [1 ]
Sugiyama, Hiroshi [1 ]
机构
[1] Kyoto Univ, Grad Sch Sci, Dept Chem, Sakyo Ku, Kyoto 6068502, Japan
关键词
D O I
10.1021/ja0626584
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We designed and synthesized pyrrole (Py)-imidazole (Im) hairpin polyamide 1-(chloromethyl)5-hydroxy-1,2-dihydro-3H-benz[e]indole (seco-CBI) conjugates 1 and 2, which target both strands of the double-stranded region of the human telomere repeat sequences, 5'-d(TTAGGG)(n)-3'/5'-d(CCCTAA)n-3'. High-resolution denaturing polyacrylamide gel electrophoresis demonstrated that conjugates 1 and 2 alkylated DNA at the 3' A of 5'-ACCCTA-3' and 5'-AGGGTTA-3', respectively. Cytotoxicities of conjugates 1 and 2 were evaluated using 39 human cancer cell lines; averages of log IC50 values for conjugates 1 and 2 were -6.96 (110 nM) and -7.24 (57.5 nM), respectively. Conjugates 1 and 2 have potential as antitumor drugs capable of targeting telomere repeat sequence.
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收藏
页码:12162 / 12168
页数:7
相关论文
共 33 条
[1]   Specific adenine alkylation by pyrrole-imidazole CBI conjugates [J].
Bando, T ;
Narita, A ;
Sasaki, S ;
Sugiyama, H .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2005, 127 (40) :13890-13895
[2]  
Bando T, 2002, CHEM-EUR J, V8, P4781, DOI 10.1002/1521-3765(20021018)8:20<4781::AID-CHEM4781>3.0.CO
[3]  
2-J
[4]   Enantioselective DNA alkylation by a pyrrole-imidazole S-CIB conjugate [J].
Bando, T ;
Narita, A ;
Asada, K ;
Ayame, H ;
Sugiyama, H .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (29) :8948-8955
[5]   Sequence specificity, reactivity, and antitumor activity of DNA-alkylating pyrrole-imidazole diamides [J].
Bando, T ;
Iida, H ;
Tao, ZF ;
Narita, A ;
Fukuda, N ;
Yamori, T ;
Sugiyama, H .
CHEMISTRY & BIOLOGY, 2003, 10 (08) :751-758
[6]   C-H to N substitution dramatically alters the sequence-specific DNA alkylation, cytotoxicity, and expression of human cancer cell lines [J].
Bando, T ;
Narita, A ;
Iwai, A ;
Kihara, K ;
Sugiyama, H .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (11) :3406-3407
[7]   Efficient DNA alkylation by a pyrrole-imidazole CBI conjugate with an indole linker: Sequence-specific alkylation with nine-base-pair recognition [J].
Bando, Toshikazu ;
Sasaki, Shunta ;
Minoshima, Masafumi ;
Dohno, Chikara ;
Shinohara, Ken-ichi ;
Narita, Akihiko ;
Sugiyama, Hiroshi .
BIOCONJUGATE CHEMISTRY, 2006, 17 (03) :715-720
[8]   Solid-phase synthesis of DNA binding polyamides on oxime resin [J].
Belitsky, JM ;
Nguyen, DH ;
Wurtz, NR ;
Dervan, PB .
BIOORGANIC & MEDICINAL CHEMISTRY, 2002, 10 (08) :2767-2774
[9]   AN EFFICIENT SYNTHESIS OF 1,2,9,9A-TETRAHYDROCYCLOPROPA[C]BENZ[E]INDOL-4-ONE (CBI) - AN ENHANCED AND SIMPLIFIED ANALOG OF THE CC-1065 AND DUOCARMYCIN ALKYLATION SUBUNITS [J].
BOGER, DL ;
MCKIE, JA .
JOURNAL OF ORGANIC CHEMISTRY, 1995, 60 (05) :1271-1275
[10]   SYNTHESIS OF N-(TERT-BUTYLOXYCARBONYL)-CBI, CBI, CBI-CDPI1, AND CBI-CDPI2 - ENHANCED FUNCTIONAL ANALOGS OF CC-1065 INCORPORATING THE 1,2,9,9A-TETRAHYDROCYCLOPROPA[C]BENZ[E]INDOL-4-ONE (CBI) LEFT-HAND SUBUNIT [J].
BOGER, DL ;
ISHIZAKI, T ;
KITOS, PA ;
SUNTORNWAT, O .
JOURNAL OF ORGANIC CHEMISTRY, 1990, 55 (23) :5823-5832