Proton transfer within the active-site cavity of carbonic anhydrase III

被引:16
作者
An, HQ
Tu, CK
Ren, K
Laipis, PJ
Silverman, DN
机构
[1] Univ Florida, Coll Med, Ctr Hlth, Dept Pharmacol & Therapeut, Gainesville, FL 32610 USA
[2] Univ Florida, Dept Biochem & Mol Biol, Gainesville, FL 32610 USA
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2002年 / 1599卷 / 1-2期
关键词
carbonic anhydrase; carbon dioxide; proton transfer; metalloenzyme; oxygen-18; mass spectrometry;
D O I
10.1016/S0167-4838(02)00374-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The maximal turnover rate of CO2 hydration catalyzed by the carbonic anhydrases is limited by proton transfer steps from the zinc-bound water to solution, steps that regenerate the catalytically active zinc-bound hydroxide. Catalysis of CO2 hydration by wild-type human carbonic anhydrase III (HCA III) (k(cat) = 2 ms(-1)) is the least efficient among the carbonic anhydrases in its class, in pall because it lacks an efficient proton shuttle residue. We have used site-directed mutagenesis to test positions within the active-site cavity of HCA III for their ability to carry out proton transfer by replacing various residues with histidine. Catalysis by wild-type HCA III and these six variants was determined from the initial velocity of hydration Of CO2 measured by stopped-flow spectrophotometry and from the exchange of 1 0 between CO2 and H2O at chemical equilibrium by mass spectrometry. The results show that histidine at three positions (Lys64His, Arg67His and Phe131His) have the capacity to transfer protons during catalysis, enhancing maximal velocity of CO2 hydration and 180 exchange from 4- to 15-fold compared with wild-type HCA III. Histidine residues at the other three positions (Trp5His, Tyr7His, Phe20His) showed no firm evidence for proton transfer. These results are discussed in terms of the stereochemistry of the active-site cavity and possible proton transfer pathways. (C) 2002 Elsevier Science B.V All rights reserved.
引用
收藏
页码:21 / 27
页数:7
相关论文
共 30 条
[1]   STRUCTURE DETERMINATION OF MURINE MITOCHONDRIAL CARBONIC-ANHYDRASE-V AT 2.45-ANGSTROM RESOLUTION - IMPLICATIONS FOR CATALYTIC PROTON-TRANSFER AND INHIBITOR DESIGN [J].
BORIACKSJODIN, PA ;
HECK, RW ;
LAIPIS, PJ ;
SILVERMAN, DN ;
CHRISTIANSON, DW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (24) :10949-10953
[2]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[3]   Carbonic anhydrase: Evolution of the zinc binding site by nature and by design [J].
Christianson, DW ;
Fierke, CA .
ACCOUNTS OF CHEMICAL RESEARCH, 1996, 29 (07) :331-339
[4]   Structural and kinetic analysis of the chemical rescue of the proton transfer function of carbonic anhydrase II [J].
Duda, D ;
Tu, CK ;
Qian, MZ ;
Laipis, P ;
Agbandje-McKenna, M ;
Silverman, DN ;
McKenna, R .
BIOCHEMISTRY, 2001, 40 (06) :1741-1748
[5]   Introduction of histidine analogs leads to enhanced proton transfer in carbonic anhydrase V [J].
Earnhardt, JN ;
Wright, SK ;
Qian, MZ ;
Tu, CK ;
Laipis, PJ ;
Viola, RE ;
Silverman, DN .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1999, 361 (02) :264-270
[6]   REFINED STRUCTURE OF BOVINE CARBONIC ANHYDRASE-III AT 2.0 ANGSTROM RESOLUTION [J].
ERIKSSON, AE ;
LILJAS, A .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1993, 16 (01) :29-42
[7]   REFINED STRUCTURE OF HUMAN CARBONIC ANHYDRASE-II AT 2.0-A RESOLUTION [J].
ERIKSSON, AE ;
JONES, TA ;
LILJAS, A .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1988, 4 (04) :274-282
[8]  
HECK RW, 1994, J BIOL CHEM, V269, P24742
[9]   Structure-based design of an intramolecular proton transfer site in murine carbonic anhydrase V [J].
Heck, RW ;
BoriackSjodin, PA ;
Qian, MZ ;
Tu, CK ;
Christianson, DW ;
Laipis, PJ ;
Silverman, DN .
BIOCHEMISTRY, 1996, 35 (36) :11605-11611
[10]  
Higgins DG, 1996, METHOD ENZYMOL, V266, P383