DNA barcoding: A molecular tool to identify Antarctic marine larvae

被引:72
作者
Webb, Karen E. [1 ]
Barnes, David K. A. [1 ]
Clark, Melody S. [1 ]
Bowden, David A. [1 ]
机构
[1] British Antarctic Survey, NERC, Div Biol Sci, Cambridge CB3 0ET, England
基金
英国自然环境研究理事会;
关键词
marine larval ecology; molecular taxonomy; mitochondrial DNA;
D O I
10.1016/j.dsr2.2006.02.013
中图分类号
P7 [海洋学];
学科分类号
0707 ;
摘要
To begin to understand overall patterns and processes influencing marine populations, communities and ecosystems, it is important to determine the timing, duration, mode and dispersal of larvae. However, few studies of the spatial and temporal variation in abundance of larvae have been undertaken at any locality, other than for a few commercially important species. In Antarctic seas the abundance and species-richness of marine larvae are key to a number of concepts (such as the validity of Thorson's rule and ecological versus evolutionary success of brooders compared to spawning species). Traditionally, marine larval identification (using microscopy), even to order level, is a time-consuming, labour-intensive and inexact process. Ontogenic changes during larval life make identification difficult and require high levels of expertise, and identification is generally confirmed only by laboratory spawning experiments. New molecular genetic methods enable faster direct identification of marine larvae to a higher resolution. Our preliminary results show that it is possible to identify larvae of Antarctic species using DNA barcoding techniques, but that the resolution is currently limited by the availability of comparative adult sequences in the DNA sequence databases. (c) 2006 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1053 / 1060
页数:8
相关论文
共 46 条
[1]   Pelagic larvae of benthic gastropods from shallow Antarctic waters of Admiralty Bay, King George Island [J].
Absher, TM ;
Boehs, G ;
Feijó, AR ;
da Cruz, AC .
POLAR BIOLOGY, 2003, 26 (06) :359-364
[2]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[3]  
ARNTZ WE, 1994, OCEANOGR MAR BIOL, V32, P241
[4]   Zoobenthic biodiversity, biomass and abundance at Adelaide Island, Antarctica [J].
Barnes, DKA ;
Brockington, S .
MARINE ECOLOGY PROGRESS SERIES, 2003, 249 :145-155
[5]   DEVELOPMENTAL TYPES OF SHALLOW-WATER ASTEROIDS OF MCMURDO SOUND, ANTARCTICA [J].
BOSCH, I ;
PEARSE, JS .
MARINE BIOLOGY, 1990, 104 (01) :41-46
[6]   ANTARCTIC BENTHIC DIVERSITY [J].
BREY, T ;
KLAGES, M ;
DAHM, C ;
GORNY, M ;
GUTT, J ;
HAIN, S ;
STILLER, M ;
ARNTZ, WE ;
WAGELE, JW ;
ZIMMERMANN, A .
NATURE, 1994, 368 (6469) :297-297
[7]   Mitochondrial COI and II provide useful markers for Wiseana (Lepidoptera: Hepialidae) species identification [J].
Brown, B ;
Emberson, RM ;
Paterson, AM .
BULLETIN OF ENTOMOLOGICAL RESEARCH, 1999, 89 (04) :287-293
[8]  
Bucklin A., 2000, P533, DOI 10.1016/B978-012327645-2/50012-8
[9]   Molecular data from the 16S rRNA gene for the phylogeny of Pectinidae (Mollusca: Bivalvia) [J].
Canapa, A ;
Barucca, M ;
Marinelli, A ;
Olmo, E .
JOURNAL OF MOLECULAR EVOLUTION, 2000, 50 (01) :93-97
[10]  
Clarke A, 2003, OCEANOGR MAR BIOL, V41, P47