Exome-wide Rare Variant Analysis Identifies TUBA4A Mutations Associated with Familial ALS

被引:296
作者
Smith, Bradley N. [1 ]
Ticozzi, Nicola [2 ,3 ]
Fallini, Claudia [4 ]
Gkazi, Athina Soragia [1 ]
Topp, Simon [1 ]
Kenna, Kevin P. [4 ,5 ]
Scotter, Emma L. [1 ]
Kost, Jason [4 ]
Keagle, Pamela [4 ]
Miller, Jack W. [1 ]
Calini, Daniela [2 ,3 ]
Vance, Caroline [1 ]
Danielson, Eric W. [4 ]
Troakes, Claire [1 ]
Tiloca, Cinzia [2 ]
Al-Sarraj, Safa [1 ]
Lewis, Elizabeth A. [4 ]
King, Andrew [1 ]
Colombrita, Claudia [2 ,3 ]
Pensato, Viviana [6 ]
Castellotti, Barbara [6 ]
De Belleroche, Jacqueline [7 ]
Baas, Frank [8 ]
ten Asbroek, Anneloor L. M. A. [8 ]
Sapp, Peter C. [4 ]
McKenna-Yasek, Diane [4 ]
McLaughlin, Russell L. [5 ]
Polak, Meraida [9 ]
Asress, Seneshaw [9 ]
Esteban-Perez, Jesus [10 ,11 ]
Munoz-Blanco, Jose Luis [12 ]
Simpson, Michael [13 ]
van Rheenen, Wouter [14 ]
Diekstra, Frank P. [14 ]
Lauria, Giuseppe [15 ]
Duga, Stefano [16 ]
Corti, Stefania [3 ,17 ]
Cereda, Cristina [18 ]
Corrado, Lucia [19 ]
Soraru, Gianni [20 ]
Morrison, Karen E. [21 ,22 ]
Williams, Kelly L. [23 ]
Nicholson, Garth A. [23 ,24 ]
Blair, Ian P. [23 ]
Dion, Patrick A. [25 ]
Leblond, Claire S. [25 ]
Rouleau, Guy A. [25 ]
Hardiman, Orla [5 ]
Veldink, Jan H. [14 ]
van den Berg, Leonard H. [14 ]
机构
[1] Kings Coll London, Ctr Neurodegenerat Res, Dept Clin Neurosci, Inst Psychiat Psychol & Neurosci, London SE5 8AF, England
[2] IRCCS Ist Auxol Italiano, Dept Neurol & Lab Neurosci, I-20149 Milan, Italy
[3] Univ Milan, Dino Ferrari Ctr, Dept Pathophysiol & Transplantat, I-20122 Milan, Italy
[4] Univ Massachusetts, Sch Med, Dept Neurol, Worcester, MA 01605 USA
[5] Univ Dublin Trinity Coll, Trinity Biomed Sci Inst, Acad Unit Neurol, Dublin 2, Ireland
[6] Fdn IRCCS Ist Neurol Carlo Besta, Unit Genet Neurodegenerat & Metab Dis, I-20133 Milan, Italy
[7] Univ London Imperial Coll Sci Technol & Med, Neurogenet Grp, Div Brain Sci, London W12 0NN, England
[8] Univ Amsterdam, Acad Med Ctr, Dept Genome Anal & Neurogenet, NL-1105 AZ Amsterdam, Netherlands
[9] Emory Univ, Dept Neurol, Atlanta, GA 30322 USA
[10] Hosp 12 Octubre, SERMAS, Unidad ELA, Inst Invest, E-28041 Madrid, Spain
[11] CIBERER, U 723, Madrid 28041, Spain
[12] Hosp Gen Gregorio Maranon, Inst Invest, Unidad ELA, SERMAS, Madrid 28007, Spain
[13] Guys Hosp, Kings Coll London, Dept Genet & Mol Med, London SE1 7EH, England
[14] Univ Med Ctr Utrecht, Brain Ctr, Dept Neurol, Rudolf Magnus Inst Neurosci, NL-3508 GA Utrecht, Netherlands
[15] Fdn IRCCS Ist Neurol Carlo Besta, Neurol Unit 3, I-20133 Milan, Italy
[16] Univ Milan, Dept Med Biotechnol & Translat Med, I-20133 Milan, Italy
[17] IRCCS Fdn Ca Granda Osped Maggiore Policlin, Neurol Unit, I-20122 Milan, Italy
[18] IRCCS C Mondino Natl Neurol Inst, Expt Neurobiol Lab, I-27100 Pavia, Italy
[19] A Avogadro Univ, IRCAD, Dept Hlth Sci, I-28100 Novara, Italy
[20] Univ Padua, Dept Neurosci, I-35122 Padua, Italy
[21] Univ Birmingham, Coll Med & Dent Sci, Sch Clin & Expt Med, Birmingham B15 2TT, W Midlands, England
[22] Univ Hosp Birmingham NHS Fdn Trust, Queen Elizabeth Hosp, Birmingham B15 2WB, W Midlands, England
[23] Macquarie Univ, Australian Sch Adv Med, Sydney, NSW 2109, Australia
[24] Univ Sydney, ANZAC Res Inst, Northcott Neurosci Lab, Sydney, NSW 2139, Australia
[25] McGill Univ, Dept Neurol & Neurosurg, Montreal Neurol Inst, Montreal, PQ H3A 2B4, Canada
[26] Kings Coll London, Inst Psychiat Psychol & Neurosci, Dept Clin Neurosci, Med Res Council,Ctr Neurodegenerat Res, London WC2R 2LS, England
[27] Univ Sheffield, Sheffield Inst Translat Neurosci, Sheffield S10 2HQ, S Yorkshire, England
[28] Univ Oxford, Nuffield Dept Clin Neurosci, Oxford OX3 9DU, England
基金
美国国家科学基金会; 英国惠康基金; 英国医学研究理事会;
关键词
AMYOTROPHIC-LATERAL-SCLEROSIS; PROGRESSIVE-MOTOR-NEURONOPATHY; NEURONAL MIGRATION; ALPHA-TUBULIN; CORTICAL DEVELOPMENT; MISSENSE MUTATION; COMPLEX TRAITS; GENE; DISEASE; MICROTUBULES;
D O I
10.1016/j.neuron.2014.09.027
中图分类号
Q189 [神经科学];
学科分类号
071006 [神经生物学];
摘要
Exome sequencing is an effective strategy for identifying human disease genes. However, this methodology is difficult in late-onset diseases where limited availability of DNA from informative family members prohibits comprehensive segregation analysis. To overcome this limitation, we performed an exome-wide rare variant burden analysis of 363 index cases with familial ALS (FALS). The results revealed an excess of patient variants within TUBA4A, the gene encoding the Tubulin, Alpha 4A protein. Analysis of a further 272 FALS cases and 5,510 internal controls confirmed the overrepresentation as statistically significant and replicable. Functional analyses revealed that TUBA4A mutants destabilize the microtubule network, diminishing its repolymerization capability. These results further emphasize the role of cytoskeletal defects in ALS and demonstrate the power of gene-based rare variant analyses in situations where causal genes cannot be identified through traditional segregation analysis.
引用
收藏
页码:324 / 331
页数:8
相关论文
共 32 条
[1]
Mutation of the Variant α-Tubulin TUBA8 Results in Polymicrogyria with Optic Nerve Hypoplasia [J].
Abdollahi, Mohammad R. ;
Morrison, Ewan ;
Sirey, Tamara ;
Molnar, Zoltan ;
Hayward, Bruce E. ;
Carr, Ian M. ;
Springell, Kelly ;
Woods, C. Geoff ;
Ahmed, Mushtaq ;
Hattingh, Louise ;
Corry, Peter ;
Pilz, Daniela T. ;
Stoodley, Neil ;
Crow, Yanick ;
Taylor, Graham R. ;
Bonthron, David T. ;
Sheridan, Eamonn .
AMERICAN JOURNAL OF HUMAN GENETICS, 2009, 85 (05) :737-744
[2]
Deletions of the heavy neurofilament subunit tail in amyotrophic lateral sclerosis [J].
Al-Chalabi, A ;
Andersen, PM ;
Nilsson, P ;
Chioza, B ;
Andersson, JL ;
Russ, C ;
Shaw, CE ;
Powell, JF ;
Leigh, PN .
HUMAN MOLECULAR GENETICS, 1999, 8 (02) :157-164
[3]
Missense mutation in the tubulin-specific chaperone E (Tbce) gene in the mouse mutant progressive motor neuronopathy, a model of human motoneuron disease [J].
Bömmel, H ;
Xie, G ;
Rossoll, W ;
Wiese, S ;
Jablonka, S ;
Boehm, T ;
Sendtner, M .
JOURNAL OF CELL BIOLOGY, 2002, 159 (04) :563-569
[4]
Mutations in the β-Tubulin Gene TUBB5 Cause Microcephaly with Structural Brain Abnormalities [J].
Breuss, Martin ;
Heng, Julian Ik-Tsen ;
Poirier, Karine ;
Tian, Guoling ;
Jaglin, Xavier Hubert ;
Qu, Zhengdong ;
Braun, Andreas ;
Gstrein, Thomas ;
Ngo, Linh ;
Haas, Matilda ;
Bahi-Buisson, Nadia ;
Moutard, Marie-Laure ;
Passemard, Sandrine ;
Verloes, Alain ;
Gressens, Pierre ;
Xie, Yunli ;
Robson, Kathryn J. H. ;
Rani, Deepa Selvi ;
Thangaraj, Kumarasamy ;
Clausen, Tim ;
Chelly, Jamel ;
Cowan, Nicholas Justin ;
Keays, David Anthony .
CELL REPORTS, 2012, 2 (06) :1554-1562
[5]
Extensive genetics of ALS A population-based study in Italy [J].
Chio, Adriano ;
Calvo, Andrea ;
Mazzini, Letizia ;
Cantello, Roberto ;
Mora, Gabriele ;
Moglia, Cristina ;
Corrado, Lucia ;
D'Alfonso, Sandra ;
Majounie, Elisa ;
Renton, Alan ;
Pisano, Fabrizio ;
Ossola, Irene ;
Brunetti, Maura ;
Traynor, Bryan J. ;
Restagno, Gabriella .
NEUROLOGY, 2012, 79 (19) :1983-1989
[6]
High-efficiency transfection of cultured primary motor neurons to study protein localization, trafficking, and function [J].
Fallini, Claudia ;
Bassell, Gary J. ;
Rossoll, Wilfried .
MOLECULAR NEURODEGENERATION, 2010, 5
[7]
Unlocking Mendelian disease using exome sequencing [J].
Gilissen, Christian ;
Hoischen, Alexander ;
Brunner, Han G. ;
Veltman, Joris A. .
GENOME BIOLOGY, 2011, 12 (09)
[8]
A frameshift deletion in peripherin gene associated with amyotrophic lateral sclerosis [J].
Gros-Louis, F ;
Larivière, R ;
Gowing, G ;
Laurent, S ;
Camu, W ;
Bouchard, JP ;
Meininger, V ;
Rouleau, GA ;
Julien, JP .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (44) :45951-45956
[9]
Mutations in the autoregulatory domain of β-tubulin 4a cause hereditary dystonia [J].
Hersheson, Joshua ;
Mencacci, Niccolo E. ;
Davis, Mary ;
MacDonald, Nicola ;
Trabzuni, Daniah ;
Ryten, Mina ;
Pittman, Alan ;
Paudel, Reema ;
Kara, Eleanna ;
Fawcett, Katherine ;
Plagnol, Vincent ;
Bhatia, Kailash P. ;
Medlar, Alan J. ;
Stanescu, Horia C. ;
Hardy, John ;
Kleta, Robert ;
Wood, Nicholas W. ;
Houlden, Henry .
ANNALS OF NEUROLOGY, 2013, 73 (04) :546-553
[10]
Effects of tubulin acetylation and tubulin acetyltransferase binding on microtubule structure [J].
Howes, Stuart C. ;
Alushin, Gregory M. ;
Shida, Toshinobu ;
Nachury, Maxence V. ;
Nogales, Eva .
MOLECULAR BIOLOGY OF THE CELL, 2014, 25 (02) :257-266