Toward spectroscopic studies of biologically relevant systems: Vibrational spectrum of adenine as a test case for performances of long-range/dispersion corrected density functionals

被引:45
作者
Biczysko, Malgorzata [1 ,2 ]
Panek, Pawel [1 ,2 ]
Barone, Vincenzo [3 ,4 ]
机构
[1] Univ Naples Federico II, Dipartimento Chim Paolo Corradini, I-80126 Naples, Italy
[2] Univ Naples Federico II, CR INSTM Village, I-80126 Naples, Italy
[3] Scuola Normale Super Pisa, I-56126 Pisa, Italy
[4] CNR, Area Ric, Ist & Proc Chim Fis, I-56124 Pisa, Italy
关键词
QUANTUM-CHEMICAL CALCULATIONS; HARMONIC APPROXIMATION; INTERACTION ENERGIES; BENZENE DIMER; GAS-PHASE; DISPERSION CORRECTIONS; STACKING INTERACTIONS; INFRARED-SPECTRA; LARGE MOLECULES; DFT-D;
D O I
10.1016/j.cplett.2009.05.030
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Several recently introduced models rooted into the density functional theory and designed for the study of weakly bound molecular systems, with particular reference to the role of dispersion interactions, have been tested for their performances in prediction of vibrational properties for adenine molecule. Results obtained by semi-empirical correction for dispersion (DFT-D), semi-local density-functionals (M05-2X, M06-2X), and long-range correction scheme (LC-omega PBE, CAM-B3LYP) have been compared to the PT2 anharmonic frequencies computed by B3LYP functional and to the experimental results. From the tested computational models only the B3LYP-D/DM scheme provided quantitative agreement with the reference data and at the same time correctly described binding of adenine dimer. (c) 2009 Elsevier B.V. All rights reserved.
引用
收藏
页码:105 / 110
页数:6
相关论文
共 50 条
[1]   Toward reliable density functional methods without adjustable parameters: The PBE0 model [J].
Adamo, C ;
Barone, V .
JOURNAL OF CHEMICAL PHYSICS, 1999, 110 (13) :6158-6170
[2]  
[Anonymous], 2017, J MOL STRUCT, DOI DOI 10.1016/J.MOLSTRUC.2017.03.014
[3]   Anharmonic vibrational properties by a fully automated second-order perturbative approach [J].
Barone, V .
JOURNAL OF CHEMICAL PHYSICS, 2005, 122 (01)
[4]   Accurate vibrational spectra of large molecules by density functional computations beyond the harmonic approximation: The case of azabenzenes [J].
Barone, V .
JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (18) :4146-4150
[5]   Vibrational spectra of large molecules by density functional computations beyond the harmonic approximation: the case of pyrrole and furan [J].
Barone, V .
CHEMICAL PHYSICS LETTERS, 2004, 383 (5-6) :528-532
[6]   FROM CONCEPTS TO ALGORITHMS FOR THE TREATMENT OF LARGE-AMPLITUDE INTERNAL MOTIONS AND UNIMOLECULAR REACTIONS [J].
BARONE, V ;
MINICHINO, C .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 1995, 330 :365-376
[7]   The role of dispersion correction to DFT for modelling weakly bound molecular complexes in the ground and excited electronic states [J].
Barone, Vincenzo ;
Biczysko, Malgorzata ;
Pavone, Michele .
CHEMICAL PHYSICS, 2008, 346 (1-3) :247-256
[8]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[9]   A new inhomogeneity parameter in density-functional theory [J].
Becke, AD .
JOURNAL OF CHEMICAL PHYSICS, 1998, 109 (06) :2092-2098
[10]   A unified density-functional treatment of dynamical, nondynamical, and dispersion correlations [J].
Becke, Axel D. ;
Johnson, Erin R. .
JOURNAL OF CHEMICAL PHYSICS, 2007, 127 (12)