Hybrid quantum mechanical/molecular dynamics simulation on parallel computers: density functional theory on real-space multigrids

被引:52
作者
Ogata, S [1 ]
Shimojo, F
Kalia, RK
Nakano, A
Vashishta, P
机构
[1] Yamaguchi Univ, Dept Appl Sci, Ube, Yamaguchi 7558611, Japan
[2] Hiroshima Univ, Fac Integrated Arts & Sci, Higashihiroshima 7398521, Japan
[3] Louisiana State Univ, Concurrent Comp Lab Mat Simulat, Baton Rouge, LA 70803 USA
基金
美国国家航空航天局; 美国国家科学基金会;
关键词
hybrid quantum mechanical/molecular dynamics simulation; density functional theory; multigrid method; parallel computing;
D O I
10.1016/S0010-4655(02)00612-4
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
A hybrid quantum mechanical/molecular dynamics simulation scheme is developed, in which a quantum mechanical system described by the density functional theory on real-space multigrids is embedded in a classical system of atoms interacting via an empirical interatomic potential. Handshake atoms coupling the quantum and the classical systems are treated by a novel scaled position method. The scheme is implemented on parallel computers using both task and spatial decompositions. An application to oxidation of Si (100) surface demonstrates seamless coupling of the quantum and the classical systems. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:30 / 38
页数:9
相关论文
共 44 条
[1]  
Allen M. P., 1987, COMPUTER SIMULATIONS, DOI [10.1093/oso/9780198803195.001.0001, DOI 10.1093/OSO/9780198803195.001.0001]
[2]   Real-space full-multigrid study of the fragmentation of Li11+ clusters [J].
Ancilotto, F ;
Blandin, P ;
Toigo, F .
PHYSICAL REVIEW B, 1999, 59 (12) :7868-7875
[3]  
BRANDT A, 1977, MATH COMPUT, V31, P333, DOI 10.1090/S0025-5718-1977-0431719-X
[4]   Real-space multigrid-based approach to large-scale electronic structure calculations [J].
Briggs, EL ;
Sullivan, DJ ;
Bernholc, J .
PHYSICAL REVIEW B, 1996, 54 (20) :14362-14375
[5]  
BROOK RJ, 1981, CONCISE ENCY ADV CER
[6]   Concurrent coupling of length scales: Methodology and application [J].
Broughton, JQ ;
Abraham, FF ;
Bernstein, N ;
Kaxiras, E .
PHYSICAL REVIEW B, 1999, 60 (04) :2391-2403
[7]   MOLECULAR-DYNAMICS WITH COMBINED QUANTUM AND EMPIRICAL POTENTIALS - C2H2 ADSORPTION ON SI(100) [J].
CARMER, CS ;
WEINER, B ;
FRENKLACH, M .
JOURNAL OF CHEMICAL PHYSICS, 1993, 99 (02) :1356-1372
[8]   ATOMIC AND ELECTRONIC-STRUCTURES OF RECONSTRUCTED SI(100) SURFACES [J].
CHADI, DJ .
PHYSICAL REVIEW LETTERS, 1979, 43 (01) :43-47
[9]   FINITE-DIFFERENCE-PSEUDOPOTENTIAL METHOD - ELECTRONIC-STRUCTURE CALCULATIONS WITHOUT A BASIS [J].
CHELIKOWSKY, JR ;
TROULLIER, N ;
SAAD, Y .
PHYSICAL REVIEW LETTERS, 1994, 72 (08) :1240-1243
[10]   HIGHER-ORDER FINITE-DIFFERENCE PSEUDOPOTENTIAL METHOD - AN APPLICATION TO DIATOMIC-MOLECULES [J].
CHELIKOWSKY, JR ;
TROULLIER, N ;
WU, K ;
SAAD, Y .
PHYSICAL REVIEW B, 1994, 50 (16) :11355-11364