The different roles of tryptophan transfer RNA in regulating trp operon expression in E-coli versus B-subtilis

被引:47
作者
Yanofsky, C [1 ]
机构
[1] Stanford Univ, Dept Biol Sci, Stanford, CA 94305 USA
基金
美国国家科学基金会;
关键词
D O I
10.1016/j.tig.2004.06.007
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Escherichia coli and Bacillus subtilis use different mechanisms of sensing and responding to tryptophan and uncharged tRNA(Trp) as regulatory signals. In E coli, tryptophan activates a repressor that binds to the trp promoter- operator, inhibiting transcription initiation. In B. subtilis, tryptophan activates an RNA-binding protein, TRAP, which binds to the trp operon leader RNA, causing transcription termination. In E. coli uncharged tRNA(Trp) accumulation stalls the ribosome attempting translation of tandem Trp codons in the leader-peptide coding region of the operon. This stalling permits the formation of an RNA antiterminator structure, preventing transcription termination. In B. subtilis uncharged tRNA(TrP) accumulation activates transcription and translation of the at operon. AT protein inhibits tryptophan-activated TRAP, thereby preventing TRAP-mediated transcription termination. These differences might reflect the unique organizational features of the respective trp operons and their ancestry.
引用
收藏
页码:367 / 374
页数:8
相关论文
共 33 条
[1]   Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA [J].
Antson, AA ;
Dodson, EJ ;
Dodson, G ;
Greaves, RB ;
Chen, XP ;
Gollnick, P .
NATURE, 1999, 401 (6750) :235-242
[2]   THE STRUCTURE OF TRP RNA-BINDING ATTENUATION PROTEIN [J].
ANTSON, AA ;
OTRIDGE, J ;
BRZOZOWSKI, AM ;
DODSON, EJ ;
DODSON, GG ;
WILSON, KS ;
SMITH, TM ;
YANG, M ;
KURECKI, T ;
GOLLNICK, P .
NATURE, 1995, 374 (6524) :693-700
[3]   Regulation of transcription attenuation and translation initiation by allosteric control of an RNA-binding protein:: the Bacillus subtilis TRAP protein [J].
Babitzke, P .
CURRENT OPINION IN MICROBIOLOGY, 2004, 7 (02) :132-139
[4]   Posttranscription initiation control of tryptophan metabolism in Bacillus subtilis by the trp RNA-binding attenuation protein (TRAP), anti-TRAP, and RNA structure [J].
Babitzke, P ;
Gollnick, P .
JOURNAL OF BACTERIOLOGY, 2001, 183 (20) :5795-5802
[5]   Genomewide transcriptional changes associated with genetic alterations and nutritional supplementation affecting tryptophan metabolism in Bacillus subtilis [J].
Berka, RM ;
Cui, XJ ;
Yanofsky, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (10) :5682-5687
[6]   Features of a leader peptide coding region that regulate translation initiation for the anti-TRAP protein of B-subtilis [J].
Chen, GN ;
Yanofsky, C .
MOLECULAR CELL, 2004, 13 (05) :703-711
[7]   Tandem transcription and translation regulatory sensing of uncharged tryptophan tRNA [J].
Chen, GN ;
Yanofsky, C .
SCIENCE, 2003, 301 (5630) :211-213
[8]   trp RNA-binding attenuation protein-5′ stem-loop RNA interaction is required for proper transcription attenuation control of the Bacillus subtilis trpEDCFBA operon [J].
Du, H ;
Yakhnin, AV ;
Dharmaraj, S ;
Babitzke, P .
JOURNAL OF BACTERIOLOGY, 2000, 182 (07) :1819-1827
[9]   The trp RNA-binding attenuation protein regulates TrpG synthesis by binding to the trpG ribosome binding site of Bacillus subtilis [J].
Du, HS ;
Tarpey, R ;
Babitzke, P .
JOURNAL OF BACTERIOLOGY, 1997, 179 (08) :2582-2586
[10]   trp RNA-binding attenuation protein-mediated long distance RNA refolding regulates translation of trpE in Bacillus subtilis [J].
Du, HS ;
Babitzke, P .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (32) :20494-20503