Production of an activated form of Bacillus stearothermophilus L-2-hydroxyacid dehydrogenase by directed evolution

被引:17
作者
Allen, SJ [1 ]
Holbrook, JJ [1 ]
机构
[1] Univ Bristol, Sch Med Sci, Dept Biochem, Mol Recognit Ctr, Bristol BS8 1TD, Avon, England
来源
PROTEIN ENGINEERING | 2000年 / 13卷 / 01期
关键词
directed evolution; fructose 1,6 bisphosphate; lactate dehydrogenase;
D O I
10.1093/protein/13.1.5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Bacillus stearothermophillus lactate dehydrogenase (bsLDH) is activated in the presence of fructose 1,6 bisphosphate (FBP), The activator is expensive and representative of the sort of co-factor complications that are undesirable in industrial processes. Three rounds of random mutagenesis and screening produced a mutant (6A) which is almost fully activated in the absence of FBP, Wild-type bsLDH has a K-M(pyr) of 5 mM in the absence of FBP but when activated (+FBP) the K-M(pyr) drops to 0.05 mM, The mutant 6A has a K-M(pyr) of 0.07 mM in the absence of FBP, 6A has three amino acid substitutions-R118C, Q203L and N307S-resulting in a 70-fold activation, none of the mutations are near the active site. The activation of wild type bsLDH is due to an FBP induced tetramerization of dimeric bsLDH bringing about a structural rearrangement of key active site residues. The most likely explanation for the activation of 6A is derived from the position of Q203L, which is at the dimer-dimer interface. The suggestion is that the hydrophilic to hydrophobic change has altered the dimer-tetramer equilibrium position towards that of the tetramer, What is significant is the activation of bsLDH by a subtle long range event produced by the 'blind' directed evolution approach.
引用
收藏
页码:5 / 7
页数:3
相关论文
共 7 条
[1]   AMINO-ACID-SEQUENCE OF THE L-LACTATE DEHYDROGENASE OF BACILLUS-CALDOTENAX DEDUCED FROM THE NUCLEOTIDE-SEQUENCE OF THE CLONED GENE [J].
BARSTOW, DA ;
MURPHY, JP ;
SHARMAN, AF ;
CLARKE, AR ;
HOLBROOK, JJ ;
ATKINSON, T .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1987, 165 (03) :581-586
[2]   FROM ANALYSIS TO SYNTHESIS - NEW LIGAND-BINDING SITES ON THE LACTATE-DEHYDROGENASE FRAMEWORK .1. [J].
CLARKE, AR ;
ATKINSON, T ;
HOLBROOK, JJ .
TRENDS IN BIOCHEMICAL SCIENCES, 1989, 14 (03) :101-105
[3]   THE ASSEMBLY MECHANISM OF THE LACTATE-DEHYDROGENASE TETRAMER FROM BACILLUS-STEAROTHERMOPHILUS - THE EQUILIBRIUM RELATIONSHIPS BETWEEN QUATERNARY STRUCTURE AND THE BINDING OF FRUCTOSE-1,6-BISPHOSPHATE, NADH AND OXAMATE [J].
CLARKE, AR ;
ATKINSON, T ;
CAMPBELL, JW ;
HOLBROOK, JJ .
BIOCHIMICA ET BIOPHYSICA ACTA, 1985, 829 (03) :387-396
[4]   THE RATES OF DEFINED CHANGES IN PROTEIN-STRUCTURE DURING THE CATALYTIC CYCLE OF LACTATE-DEHYDROGENASE [J].
CLARKE, AR ;
WALDMAN, ADB ;
HART, KW ;
HOLBROOK, JJ .
BIOCHIMICA ET BIOPHYSICA ACTA, 1985, 829 (03) :397-407
[5]   Guided evolution of enzymes with new substrate specificities [J].
ElHawrani, AS ;
Sessions, RB ;
Moreton, KM ;
Holbrook, JJ .
JOURNAL OF MOLECULAR BIOLOGY, 1996, 264 (01) :97-110
[6]  
LEATHERBARROW RJ, 1989, GRAFIT
[7]   RAPID EVOLUTION OF A PROTEIN IN-VITRO BY DNA SHUFFLING [J].
STEMMER, WPC .
NATURE, 1994, 370 (6488) :389-391