Implementation of Proteomics for Cancer Research: Past, Present, and Future

被引:12
作者
Karimi, Parisa [1 ]
Shahrokni, Armin [2 ]
Ranjbar, Mohammad R. Nezami [3 ]
机构
[1] Johns Hopkins Bloomberg Sch Publ Hlth, Baltimore, MD 21205 USA
[2] Mem Sloan Kettering Canc Ctr, Geriatr Oncol Serv, New York, NY 10021 USA
[3] Virginia Polytech Inst & State Univ, Dept Elect & Comp Engn, Blacksburg, VA 24061 USA
关键词
Proteomics; cancer; biomarkers; mass spectrometry; bioinformatics; SPECTROMETRY-BASED PROTEOMICS; MASS-SPECTROMETRY; SERUM BIOMARKERS; BREAST-CANCER; HEPATOCELLULAR-CARCINOMA; PROTEIN MICROARRAYS; GASTRIC-CANCER; IDENTIFICATION; EXPRESSION; NANOTECHNOLOGY;
D O I
10.7314/APJCP.2014.15.6.2433
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Cancer is the leading cause of the death, accounts for about 13% of all annual deaths worldwide. Many different fields of science are collaborating together studying cancer to improve our knowledge of this lethal disease, and find better solutions for diagnosis and treatment. Proteomics is one of the most recent and rapidly growing areas in molecular biology that helps understanding cancer from an omics data analysis point of view. The human proteome project was officially initiated in 2008. Proteomics enables the scientists to interrogate a variety of biospecimens for their protein contents and measure the concentrations of these proteins. Current necessary equipment and technologies for cancer proteomics are mass spectrometry, protein microarrays, nanotechnology and bioinformatics. In this paper, we provide a brief review on proteomics and its application in cancer research. After a brief introduction including its definition, we summarize the history of major previous work conducted by researchers, followed by an overview on the role of proteomics in cancer studies. We also provide a list of different utilities in cancer proteomics and investigate their advantages and shortcomings from theoretical and practical angles. Finally, we explore some of the main challenges and conclude the paper with future directions in this field.
引用
收藏
页码:2433 / 2438
页数:6
相关论文
共 85 条
[1]  
Ardekani AM, 2008, ARCH IRAN MED, V11, P427, DOI 08114/AIM.0015
[2]   Proteomics-based identification of a group of apoptosis-related proteins and biomarkers in gastric cancer [J].
Bai, Zhigang ;
Ye, Yingjiang ;
Liang, Bin ;
Xu, Feng ;
Zhang, Hui ;
Zhang, Yanbin ;
Peng, Jiarou ;
Shen, Danhua ;
Cui, Zhirong ;
Zhang, Zhongtao ;
Wang, Shan .
INTERNATIONAL JOURNAL OF ONCOLOGY, 2011, 38 (02) :375-383
[3]   Mass spectrometry for translational proteomics: progress and clinical implications [J].
Baker, Erin Shammel ;
Liu, Tao ;
Petyuk, Vladislav A. ;
Burnum-Johnson, Kristin E. ;
Ibrahim, Yehia M. ;
Anderson, Gordon A. ;
Smith, Richard D. .
GENOME MEDICINE, 2012, 4
[4]   Omics of Cancer [J].
Bhati, Aniruddha ;
Garg, H. ;
Gupta, A. ;
Chhabra, H. ;
Kumari, A. ;
Patel, T. .
ASIAN PACIFIC JOURNAL OF CANCER PREVENTION, 2012, 13 (09) :4229-4233
[5]   Mass spectrometry-based targeted quantitative proteomics: Achieving sensitive and reproducible detection of proteins [J].
Boja, Emily S. ;
Rodriguez, Henry .
PROTEOMICS, 2012, 12 (08) :1093-1110
[6]   EPIGENETICS Unravelling the cancer code [J].
Brower, Vicki .
NATURE, 2011, 471 (7339) :S12-S13
[7]   Cancer research: past, present and future [J].
Cao, Ya ;
DePinho, Ronald A. ;
Ernst, Matthias ;
Vousden, Karen .
NATURE REVIEWS CANCER, 2011, 11 (10) :749-754
[8]   Identification of specific reachable molecular targets in human breast cancer using a versatile ex vivo proteomic method [J].
Castronovo, Vincent ;
Kischel, Philippe ;
Guillonneau, Francois ;
de Leval, Laurence ;
Defechereux, Thierry ;
De Pauw, Edwin ;
Neri, Dario ;
Waltregny, David .
PROTEOMICS, 2007, 7 (08) :1188-1196
[9]  
Chandra H, 2011, EXPERT REV PROTEOMIC, V8, P61, DOI [10.1586/epr.10.99, 10.1586/EPR.10.99]
[10]   Systematic Search for Recipes to Generate Induced Pluripotent Stem Cells [J].
Chang, Rui ;
Shoemaker, Robert ;
Wang, Wei .
PLOS COMPUTATIONAL BIOLOGY, 2011, 7 (12)