Pattern and distribution of immunoglobulin VH gene usage in a cohort of B-CLL patients from a northeastern region of Italy

被引:15
作者
Donisi, Pietro Maria [1 ]
Di Lorenzo, Nadia
Riccardi, Manuela
Paparella, Alessandro
Sarpellon, Claudia
Zupo, Simona
Bertoldero, Giovanni
Minotto, Claudia
Stracca-Pansa, Vincenzo
机构
[1] Dept Pathol, Venice, Italy
[2] Div Haematol, Venice, Italy
[3] Natl Inst Canc Res, Div Med Oncol, Genoa, Italy
[4] Div Oncol, Noale, VE, Italy
关键词
B-CLL mutational analysis; VDJ rearrangements; V-H gene usage; B-CLL V-H gene sequencing;
D O I
10.1097/01.pdm.0000213469.85301.d6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 [生物化学与分子生物学]; 081704 [应用化学];
摘要
We analyzed individual V-H gene rearrangements in 55 consecutive B-chronic lymphocytic leukemia (B-CLL) patients collected from a northeastern region of Italy, stressing the possible differences related to geographic characteristics of the cohorts studied. Considering the percentage of somatic mutations present in the VH gene sequences and using the 98% cut-off value, 38 of the 55 B-CLL (69%) patients displayed somatic hypermutations and 17 (31%) had a germline configuration. Our results confirm and extend the observations of a bias in the use of certain V-H, D-H, and J(H) genes among B-CLL cells. The most frequently used V-H genes were V(H)1-69 (12.7%) with V(H)3-23 (12.7%) and V(H)4-34 (10.9%). Collectively these genes accounted for 36.3% of the cases. In the mutated cases, the range of mutations varied from 2% to 15%, with a median of 6.5%. V(H)1-69 (7 cases, all unmutated) carried few mutations as opposed to VH3-23 (7 cases, 5 of which mutated), VH4-34 (6 cases, all mutated), and V(H)3-30 (5 cases, all mutated), which show a high load of mutations. D3 family genes were found frequently (38.1%) followed by D2 (27.2%) and D6 (18.1%). The individual D segment most frequently used was D3-3, which was present in 16.3% of cases. There was predominance of the J(H)4 gene (49%) followed by J(H)6 (40%). Analysis of the distribution of replacement and silent mutations in the mutated sequences using the method of Lossos showed in 39.4% of cases evidence of antigen selection in the framework region and/or complementary determining regions. In comparison with a recent study on B-CLL patients from the Mediterranean area, the VH4-34 gene was significantly overused in the mutated group at a percentage double that of the Italian cohort reported in this study (10.9% vs. 5%), but at a frequency similar to the entire Mediterranean region (10.7%). We also found an over-representation of VH1-69 usage in the germline group, at a frequency (12.7%) higher than previously described by the same authors (Italian 8%, Mediterranean 10.7%). On the contrary, V(H)3-07 and V(H)3-49 were not much used in our study (5.4% and 1.8%, respectively) compared with the Italian group (8% and 5.1%). In our study, V(H)3-23 gene segment was frequently expressed, at frequency as high as that of V(H)1-69, a finding in keeping with reported B-CLL Italian data, but higher than the entire series of the Mediterranean area (12.7% vs. 9.2%); V(H)3-21 gene, frequently expressed in northern European CLL but rarely in the Mediterranean area, was completely absent. This biased usage Of VH family genes may reflect a geographic leukemic repertoire, perhaps owing to a peculiar genetic background, depending on variations in germline composition of the IgVH locus or to the effect of a potential environmental element less frequently encountered in different regions.
引用
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页码:206 / 215
页数:10
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