Crystal structure of Escherichia coli UvrB C-terminal domain, and a model for UvrB-UvrC interaction

被引:37
作者
Sohi, M
Alexandrovich, A
Moolenaar, G
Visse, R
Goosen, N
Vernede, X
Fontecilla-Camps, JC
Champness, J
Sanderson, MR
机构
[1] Kings Coll London, Randall Inst, London WC2B 5RL, England
[2] Leiden Univ, Leiden Inst Chem, Gorlaeus Labs, NL-2300 RA Leiden, Netherlands
[3] CEA, CNRS, Inst Biol Struct Jean Pierre Ebel, Lab Cristallog & Cristallogenese, F-98027 Grenoble 1, France
关键词
nucleotide excision repair; X-ray crystallography; UvrB protein; UvrB-C interaction;
D O I
10.1016/S0014-5793(99)01690-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A crystal structure of the C-terminal domain of Escherichia coli UvrB (UvrB') has been solved to 3.0 Angstrom resolution. The domain adopts a helix-loop-helix fold which is stabilised by the packing of hydrophobic side-chains between helices, From the UvrB' fold, a model for a domain of UvrC (UvrC') that has high sequence homology with UvrB' has been made. In the crystal, a dimerisation of UvrB' domains is seen involving specific hydrophobic and salt bridge interactions between residues in and close to the loop region of the domain. It is proposed that a homologous mode of interaction may occur between UvrB and UvrC. This interaction is likely to be flexible, potentially spanning > 50 Angstrom. (C) 2000 Federation of European Biochemical Societies.
引用
收藏
页码:161 / 164
页数:4
相关论文
共 21 条
[1]   NMR assignments and secondary structure of the UvrC binding domain of UvrB [J].
Alexandrovich, A ;
Sanderson, MR ;
Moolenaar, GF ;
Goosen, N ;
Lane, AN .
FEBS LETTERS, 1999, 451 (02) :181-185
[2]  
ALEXANDROVICH A, UNPUB
[3]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[4]   FREE R-VALUE - A NOVEL STATISTICAL QUANTITY FOR ASSESSING THE ACCURACY OF CRYSTAL-STRUCTURES [J].
BRUNGER, AT .
NATURE, 1992, 355 (6359) :472-475
[5]   CRYSTALLOGRAPHIC R-FACTOR REFINEMENT BY MOLECULAR-DYNAMICS [J].
BRUNGER, AT ;
KURIYAN, J ;
KARPLUS, M .
SCIENCE, 1987, 235 (4787) :458-460
[6]   Preparation of selenomethionyl proteins for phase determination [J].
Doublie, S .
MACROMOLECULAR CRYSTALLOGRAPHY, PT A, 1997, 276 :523-530
[7]  
GOOSEN N, 1998, NUCL ACIDS MOL BIOL
[8]   SELENOMETHIONYL PROTEINS PRODUCED FOR ANALYSIS BY MULTIWAVELENGTH ANOMALOUS DIFFRACTION (MAD) - A VEHICLE FOR DIRECT DETERMINATION OF 3-DIMENSIONAL STRUCTURE [J].
HENDRICKSON, WA ;
HORTON, JR ;
LEMASTER, DM .
EMBO JOURNAL, 1990, 9 (05) :1665-1672
[9]  
LIN JJ, 1992, J BIOL CHEM, V267, P17693
[10]   Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus [J].
Machius, M ;
Henry, L ;
Palnitkar, M ;
Deisenhofer, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (21) :11717-11722