Expansion of scalar validation criteria to three dimensions:: the R tensor

被引:45
作者
Parkin, S [1 ]
机构
[1] Duke Univ, Med Ctr, Dept Biochem, Durham, NC 27710 USA
来源
ACTA CRYSTALLOGRAPHICA SECTION A | 2000年 / 56卷
关键词
D O I
10.1107/S010876739901497X
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Assessment of quality in crystal structure determination entails analysis of global statistics. In data reduction, quality is assessed using R-merge and mean I/sigma(I). Progress in structure solution and refinement is checked by the goodness of fit, variants of the R index, R-cryst, and its cross-validation counterpart, R-free. These statistics are useful and provide a convenient means of comparison but their scalar nature renders them unable to capture the essence of three-dimensional entities such as diffraction patterns and molecular models. A simple general method to quantify spatial variations in scalar statistics has been developed. In it, a symmetric matrix, the R tensor, is used to represent the local average residual as a function of diffraction geometry. An effective value of the statistic in question can then be found for any direction in reciprocal space. Differences between these effective R indices for individual reflections or groups of reflections can help to steer refinement strategy and assess the final structure.
引用
收藏
页码:157 / 162
页数:6
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