Prospects for kinematical least-squares refinement in polymer electron crystallography

被引:13
作者
Dorset, DL
Gilmore, CJ
机构
[1] Hauptman Woodward Med Res Inst, Electron Diffract Dept, Buffalo, NY 14203 USA
[2] Univ Glasgow, Dept Chem, Glasgow G12 8QQ, Lanark, Scotland
来源
ACTA CRYSTALLOGRAPHICA SECTION A | 2000年 / 56卷
关键词
D O I
10.1107/S0108767399010818
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Least-squares refinement is unusual in the context of electron crystallography because of the sparsity of the measured intensity data set and the problems of systematic errors due to multiple dynamical scattering. With 120 unique hkl electron diffraction intensities measured from polymorphic form III of isotactic poly(1-butene), conditions for improving an existing structural model derived from initial direct structure analysis have been evaluated. The polymer crystallizes in space group P2(1)2(1)2(1) with a = 12.38, b = 8.88, c = 7.56 Angstrom and there are 8 unique atoms in the asymmetric unit. Starting with atomic positions resulting from Fourier refinement, four cycles of least-squares refinement, where the positional shifts of atomic positions were constrained, produced better bonding parameters than found before while lowering the conventional crystallographic residual, based on \F\, from an overall value of R = 0.26 to R = 0.185 for the 58 most intense reflections where \F-h(obs)\ greater than or equal to 4 sigma < F-h(obs)> or 0.216 for the complete data sec of 120 reflections. The weighted residuals based on \F\(2) fell from 0.50 to 0.41 for the complete data set. This refinement was not improved however when attempts were made to fill in very weak intensities by default values. Also, effects of multiple-scattering perturbations were found in the irregularity of the final isotropic thermal parameters.
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页码:62 / 67
页数:6
相关论文
共 40 条
[1]   DIRECT PHASE DETERMINATION BY ENTROPY MAXIMIZATION AND LIKELIHOOD RANKING - STATUS-REPORT AND PERSPECTIVES [J].
BRICOGNE, G .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1993, 49 :37-60
[2]   A MULTISOLUTION METHOD OF PHASE DETERMINATION BY COMBINED MAXIMIZATION OF ENTROPY AND LIKELIHOOD .3. EXTENSION TO POWDER DIFFRACTION DATA [J].
BRICOGNE, G .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :803-829
[3]   ELECTRON-DIFFRACTION OF SYNTHETIC-POLYMERS - THE MODEL-COMPOUND APPROACH TO POLYMER STRUCTURE [J].
BRISSE, F .
JOURNAL OF ELECTRON MICROSCOPY TECHNIQUE, 1989, 11 (04) :272-279
[4]  
BUERGER MJ, 1960, CRYSTAL STRUCTURE AN, P619
[5]  
CAMPBELLSMITH PJ, 1978, ACTA CRYSTALLOGR A, V34, P3
[6]   AN ELECTRON-DIFFRACTION STUDY OF MANNAN .1. CRYSTAL AND MOLECULAR-STRUCTURE [J].
CHANZY, H ;
PEREZ, S ;
MILLER, DP ;
PARADOSSI, G ;
WINTER, WT .
MACROMOLECULES, 1987, 20 (10) :2407-2413
[7]  
COJAZZI G, 1976, MAKROMOL CHEM, V177, P915
[8]  
COWLEY JM, 1967, PROG MATER SCI, V13, P267
[9]  
COWLEY JM, 1995, DIFFRACTION PHYSICS, P374
[10]   Remarks about protein structure precision [J].
Cruickshank, DWJ .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1999, 55 :583-601