LMPD: LIPID MAPS proteome database

被引：64

作者：

Cotter, Dawn

Maer, Andreia

Guda, Chittibabu

Saunders, Brian

Subramaniam, Shankar

机构：

[1] Univ Calif San Diego, San Diego Supercomp Ctr, La Jolla, CA 92093 USA

[2] SUNY Albany, GenNYsis Ctr Excellence Canc Gen, Rensselaer, NY 12144 USA

[3] SUNY Albany, Dept Epidemiol & Biostat, Rensselaer, NY 12144 USA

[4] Univ Calif San Diego, Dept Bioengn, La Jolla, CA 92093 USA

[5] Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA 92093 USA

来源：

NUCLEIC ACIDS RESEARCH | 2006年 / 34卷

关键词：

D O I：

10.1093/nar/gkj122

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The LIPID MAPS Proteome Database (LMPD) is an object-relational database of lipid-associated protein sequences and annotations. The initial release contains 2959 records, representing human and mouse proteins involved in lipid metabolism. UniProt IDs were obtained based on keyword search of KEGG and GO databases, and this LMPD protein list was then enhanced with annotations from UniProt, EntrezGene, ENZYME, GO, KEGG and other public resources. We also assigned associations with general lipid categories, based on GO and KEGG annotations. Users may search LMPD by database ID or keyword, and filter by species and/or lipid class associations; from the search results, one can then access a compilation of data relevant to each protein of interest, cross-linked to external databases. The LIPID MAPS Proteome Database (LMPD) is publicly available from the LIPID MAPS Consortium website (http://www.lipidmaps.org/). The direct URL is http://www.lipidmaps.org/ data/proteome/index.cgi.

引用

页码：D507 / D510

页数：4

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