AFLPOP: a computer program for simulated and real population allocation, based on AFLP data

被引：164

作者：

Duchesne, P ^{[1
]}

Bernatchez, L ^{[1
]}

机构：

[1] Univ Laval, Dept Biol, Ste Foy, PQ G1K 7P4, Canada

来源：

MOLECULAR ECOLOGY NOTES | 2002年 / 2卷 / 03期

关键词：

AFLP; likelihood; multi-locus-genotype; population assignment; software; simulation;

D O I：

10.1046/j.1471-8286.2002.00251.x

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

AFLPOP is a population allocation and simulator program based on amplified fragment length polymorphism markers. The allocation method is an adaptation of Paetkau's method for co-dominant alleles. Besides population allocation of specimens of unknown origin, re-allocation of sample genotypes, as well as allocation of artificial (Monte Carlo) specimens, may be run to estimate expected rates of correct allocations, Thanks to its embodied simulator, AFLPOP can provide information on the rates and types of incorrect allocations and on empirical distributions of likelihood statistics. A filtering procedure within AFLPOP allows the selection of loci according to user-defined criteria.

引用

页码：380 / 383

页数：4

共 10 条

[1] WHICHRUN (version 3.2): A computer program for population assignment of individuals based on multilocus genotype data [J].