Genomic ancestry of a sample population from the state of Sao Paulo, Brazil

被引:33
作者
Ferreira, Luzitano Brandao [1 ]
Mendes-Junior, Celso Teixeira [1 ]
Vieira Wiezel, Claudia Emilia [1 ]
Luizon, Marcelo Rizzatti [1 ]
Simoes, Aguinaldo Luiz [1 ]
机构
[1] Univ Sao Paulo, Dept Genet, Fac Med Ribeirao Preto, BR-14049900 Sao Paulo, Brazil
关键词
D O I
10.1002/ajhb.20474
中图分类号
Q98 [人类学];
学科分类号
030303 [人类学];
摘要
Allelic frequencies of eight autosomal short-tandem repeat (STR) loci (TH01, TPOx, CSF1PO, vWA, FES/FPS, F13A1, F13B, and CD4) were determined in 400 individuals born in the State of Sao Paulo. No significant deviations from Hardy-Weinberg equilibrium were found in any loci analyzed. The Unweighted Pair-Group Method with Arithmetic Mean (UPGMA) tree constructed based on genetic distances revealed that the present population was grouped with Europeans, and separated from African and Amerindian populations. Estimates of admixture components based on the gene identity method revealed 79% European, 14% African, and 7% Amerindian contributions to this Brazilian population sample.
引用
收藏
页码:702 / 705
页数:4
相关论文
共 15 条
[1]
Contribution for an African autosomic STR database (AmpF/STR Identifiler and Powerplex 16 System) and a report on genotypic variations [J].
Alves, C ;
Gusmao, L ;
Damasceno, A ;
Soares, B ;
Amorim, A .
FORENSIC SCIENCE INTERNATIONAL, 2004, 139 (2-3) :201-205
[2]
The ancestry of Brazilian mtDNA lineages [J].
Alves-Silva, J ;
Santos, MD ;
Guimaraes, PEM ;
Ferreira, ACS ;
Bandelt, HJ ;
Pena, SDJ ;
Prado, VF .
AMERICAN JOURNAL OF HUMAN GENETICS, 2000, 67 (02) :444-461
[3]
Genetic influences on health - Does race matter? [J].
Bamshad, M .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2005, 294 (08) :937-946
[4]
17 STR data (AmpF/STR Identifiler and Powerplex 16 System) from Cabinda (Angola) [J].
Beleza, S ;
Alves, C ;
Reis, F ;
Amorim, A ;
Carracedo, A ;
Gusmao, L .
FORENSIC SCIENCE INTERNATIONAL, 2004, 141 (2-3) :193-196
[5]
The phylogeography of Brazilian Y-chromosome lineages [J].
Carvalho-Silva, DR ;
Santos, FR ;
Rocha, J ;
Pena, SDJ .
AMERICAN JOURNAL OF HUMAN GENETICS, 2001, 68 (01) :281-286
[6]
Curtin PhilipD., 1969, ATLANTIC SLAVE TRADE
[7]
Felsenstein J., 2005, PHYLIP PHYLOGENY INF, DOI DOI 10.1111/J.1096-0031.1989.TB00562.X
[8]
Italian population data on thirteen short tandem repeat loci: HUMTH01, D21S11, D18S51, HUMVWFA31, HUMFIBRA, D8S1179, HUMTPOX, HUMCSF1PO, D16S539, D7S820, D13S317, D5S818, D3S1358 [J].
Garofano, L ;
Pizzamiglio, M ;
Vecchio, C ;
Lago, G ;
Floris, T ;
D'Errico, G ;
Brembilla, G ;
Romano, A ;
Budowle, B .
FORENSIC SCIENCE INTERNATIONAL, 1998, 97 (01) :53-60
[9]
Genetic profile of a multi-ethnic population from Guine-Bissau (west African coast) using the new PowerPlex® 16 System kit [J].
Gonçalves, R ;
Jesus, J ;
Fernandes, AT ;
Brehm, A .
FORENSIC SCIENCE INTERNATIONAL, 2002, 129 (01) :78-80
[10]
HAMMOND HA, 1994, AM J HUM GENET, V55, P175