Localization, and sequence analysis of the phnH gene encoding 2-hydroxypent-2,4-dienoate hydratase in Pseudomonas sp. strain DJ77

被引:13
作者
Kim, S
Kweon, OK
Kim, Y
Kim, CK
Lee, KS
Kim, YC
机构
[1] CHUNGBUK NATL UNIV,SCH LIFE SCI,CHONJU 361763,SOUTH KOREA
[2] CHUNGBUK NATL UNIV,DEPT PHARM,CHONJU 361763,SOUTH KOREA
[3] PAI CHAI UNIV,DEPT BIOL,TAEJON 302735,SOUTH KOREA
关键词
D O I
10.1006/bbrc.1997.6959
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The phnDEFG genes of Pseudomonas sp. DJ77, which are responsible for the degradation of polyaromatic hydrocarbons and chlorinated aromatics, were located previously on the 6,8 kb XhoI fragment of chromosomal DNA. Here, we sequenced a downstream region hitherto unknown and identified the phnH gene encoding a 2-hydroxypent-2,4-dienoate hydratase, which is required for the conversion of 2-hydroxypent-2,4-dienoate to 4-hydroxy-2-oxovalerate in the meta-cleavage pathway of catechols, The relative position of the hydratase gene in the phn operon is unique compared to the other meta-cleavage operons which have a dehydrogenative branch of the pathway. The PhnH hydratase contains 264 amino acids with a Mr of 28043. The deduced amino acid sequence of the PhnH enzyme is 60.9-31.6% identical to those of homologous enzymes encoded by the todG, bphE, cmtF, bphH, bphX1, xylJ, dmpE, cumE, MTCY03C7.20 and etbE genes. (C) 1997 Academic Press.
引用
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页码:56 / 60
页数:5
相关论文
共 22 条
[1]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[2]   p-Cumate catabolic pathway in Pseudomonas putida F1: Cloning and characterization of DNA carrying the cmt operon [J].
Eaton, RW .
JOURNAL OF BACTERIOLOGY, 1996, 178 (05) :1351-1362
[3]   Crystal structure of enoyl-coenzyme A (CoA) hydratase at 2.5 angstrom resolution: A spiral fold defines the CoA-binding pocket [J].
Engel, CK ;
Mathieu, M ;
Zeelen, JP ;
Hiltunen, JK ;
Wierenga, RK .
EMBO JOURNAL, 1996, 15 (19) :5135-5145
[4]   Cloning and nucleotide sequences of the genes involved in the meta-cleavage pathway of cumene degradation in Pseudomonas fluorescens IP01 [J].
Habe, H ;
Kimura, T ;
Nojiri, H ;
Yamane, H ;
Omori, T .
JOURNAL OF FERMENTATION AND BIOENGINEERING, 1996, 81 (03) :247-254
[5]   THE META-CLEAVAGE OPERON OF TOL DEGRADATIVE PLASMID PWW0 COMPRISES 13 GENES [J].
HARAYAMA, S ;
REKIK, M .
MOLECULAR & GENERAL GENETICS, 1990, 221 (01) :113-120
[6]   ROLES OF THE DIVERGENT BRANCHES OF THE META-CLEAVAGE PATHWAY IN THE DEGRADATION OF BENZOATE AND SUBSTITUTED BENZOATES [J].
HARAYAMA, S ;
MERMOD, N ;
REKIK, M ;
LEHRBACH, PR ;
TIMMIS, KN .
JOURNAL OF BACTERIOLOGY, 1987, 169 (02) :558-564
[7]   THE BIPHENYL POLYCHLORINATED BIPHENYL-DEGRADATION LOCUS (BPH) OF PSEUDOMONAS SP LB400 ENCODES 4 ADDITIONAL METABOLIC ENZYMES [J].
HOFER, B ;
BACKHAUS, S ;
TIMMIS, KN .
GENE, 1994, 144 (01) :9-16
[8]   DNA-SEQUENCE DETERMINATION OF THE TOL PLASMID (PWWO) XYLGFJ GENES OF PSEUDOMONAS-PUTIDA - IMPLICATIONS FOR THE EVOLUTION OF AROMATIC CATABOLISM [J].
HORN, JM ;
HARAYAMA, S ;
TIMMIS, KN .
MOLECULAR MICROBIOLOGY, 1991, 5 (10) :2459-2474
[9]   NUCLEOTIDE-SEQUENCE AND FUNCTIONAL-ANALYSIS OF THE META-CLEAVAGE PATHWAY INVOLVED IN BIPHENYL AND POLYCHLORINATED BIPHENYL DEGRADATION IN PSEUDOMONAS SP STRAIN KKS102 [J].
KIKUCHI, Y ;
YASUKOCHI, Y ;
NAGATA, Y ;
FUKUDA, M ;
TAKAGI, M .
JOURNAL OF BACTERIOLOGY, 1994, 176 (14) :4269-4276
[10]  
KIM CK, 1987, KOREAN J MICROBIOL, V25, P122