A stochastic approach to molecular replacement

被引:45
作者
Glykos, NM
Kokkinidis, M
机构
[1] FORTH, IMBB, Iraklion 71110, Crete, Greece
[2] Univ Crete, Dept Biol, Iraklion 71409, Crete, Greece
来源
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2000年 / 56卷
关键词
D O I
10.1107/S0907444999015322
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The classical approach to the problem of placing n copies of a search model in the asymmetric unit of a target crystal structure is to divide this Gn-dimensional optimization problem into a succession of three-dimensional searches (rotation-function followed by translation-function searches for each of the models). Here, it is shown that a structure determination method based on a reverse Monte Carlo minimization of a suitably chosen statistic in the 6n-dimensional space defined by the rotational and translational parameters of the n molecules is both feasible and practical, at least for small n, Because all parameters of all molecules are determined simultaneously, this algorithm is expected to improve the signal-to-noise ratio in difficult cases involving high crystallographic/non-crystallographic symmetry in tightly packed crystal forms. Preliminary results from the application of this method (obtained with a space-group general computer program which has been developed for this purpose) are presented.
引用
收藏
页码:169 / 174
页数:6
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