Stretching DNA: Role of electrostatic interactions

被引:15
作者
Lee, N [1 ]
Thirumalai, D [1 ]
机构
[1] Univ Maryland, Inst Phys Sci & Technol, College Pk, MD USA
关键词
D O I
10.1007/s100510051043
中图分类号
O469 [凝聚态物理学];
学科分类号
070205 ;
摘要
The effect of electrostatic interactions on the stretching of DNA is investigated using a simple worm like chain model. In the limit of small force there are large conformational fluctuations which are treated using a self-consistent variational approach. For small values of the external force f, we find the extension scales as fr(D) where r(D) is the Debye screening length. In the limit of large force the electrostatic effects can be accounted for within the semiflexible chain model of DNA by assuming that only small excursions from rod-like conformations are possible. In this regime the extension approaches the contour length as 1/root f where f is the magnitude of the external force. The theory is used to analyze experiments that have measured the extension of double-stranded DNA subject to tension at various salt concentrations. The theory reproduces nearly quantitatively the elastic response of DNA at small and large values of f and for all concentration of the monovalent counterions. The limitations of the theory are also pointed out.
引用
收藏
页码:599 / 605
页数:7
相关论文
共 23 条
[1]  
Barrat JL, 1996, ADV CHEM PHYS, V94, P1, DOI 10.1002/9780470141533.ch1
[2]   PERSISTENCE LENGTH OF POLYELECTROLYTE CHAINS [J].
BARRAT, JL ;
JOANNY, JF .
EUROPHYSICS LETTERS, 1993, 24 (05) :333-338
[3]   Ionic effects on the elasticity of single DNA molecules [J].
Baumann, CG ;
Smith, SB ;
Bloomfield, VA ;
Bustamante, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (12) :6185-6190
[4]   DEFORMATIONS OF ONE TETHERED CHAIN IN STRONG FLOWS [J].
BROCHARDWYART, F .
EUROPHYSICS LETTERS, 1993, 23 (02) :105-111
[5]  
Doi M., 1986, The theory of polymer dynamics
[6]   SIZE OF A POLYMER MOLECULE IN SOLUTION .1. EXCLUDED VOLUME PROBLEM [J].
EDWARDS, SF ;
SINGH, P .
JOURNAL OF THE CHEMICAL SOCIETY-FARADAY TRANSACTIONS II, 1979, 75 :1001-1019
[7]  
FIXMAN M, 1973, J CHEM PHYS, V58, P1564, DOI 10.1063/1.1679396
[8]   Semiflexible chains under tension [J].
Ha, BY ;
Thirumalai, D .
JOURNAL OF CHEMICAL PHYSICS, 1997, 106 (10) :4243-4247
[9]   A MEAN-FIELD MODEL FOR SEMIFLEXIBLE CHAINS [J].
HA, BY ;
THIRUMALAI, D .
JOURNAL OF CHEMICAL PHYSICS, 1995, 103 (21) :9408-9412
[10]   Persistence length of flexible polyelectrolyte chains [J].
Ha, BY ;
Thirumala, D .
JOURNAL OF CHEMICAL PHYSICS, 1999, 110 (15) :7533-7541