Structure elucidation of glycoprotein glycans and of polysaccharides by NMR spectroscopy

被引:18
作者
Leeflang, BR [1 ]
Faber, EJ [1 ]
Erbel, P [1 ]
Vliegenthart, JFG [1 ]
机构
[1] Univ Utrecht, Bijvoet Ctr Biomol Res, NL-3508 TB Utrecht, Netherlands
关键词
glycoproteins; exopolysaccharides; NMR spectroscopy; structure determination;
D O I
10.1016/S0168-1656(99)00212-6
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The applicability of H-1-NMR spectroscopy for the determination of the primary and tertiary structure of carbohydrate-containing molecules is demonstrated. For classes of known compounds the characterization can be based on chemical shifts observed in 1D NMR spectra with or without the aid of a computer database. For more complex structure determinations 2D NMR techniques are required. Here the application of 2D NMR is demonstrated for the primary structure determination of two bacterial exopolysaccharides, for the spatial structure determination of a disaccharide and a glycoprotein hormone. (C) 2000 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:115 / 122
页数:8
相关论文
共 16 条
[1]  
DeBeer T, 1996, EUR J BIOCHEM, V241, P229
[2]   THE COMPLEX CARBOHYDRATE STRUCTURE DATABASE [J].
DOUBET, S ;
BOCK, K ;
SMITH, D ;
DARVILL, A ;
ALBERSHEIM, P .
TRENDS IN BIOCHEMICAL SCIENCES, 1989, 14 (12) :475-477
[3]  
ERBEL PJA, 1999, EUR J BIOCH, V260
[4]   The exopolysaccharides produced by Streptococcus thermophilus Rs and Sts have the same repeating unit but differ in viscosity of their milk cultures [J].
Faber, EJ ;
Zoon, P ;
Kamerling, JP ;
Vliegenthart, JFG .
CARBOHYDRATE RESEARCH, 1998, 310 (04) :269-276
[5]   DETERMINATION OF D AND L CONFIGURATION OF NEUTRAL MONOSACCHARIDES BY HIGH-RESOLUTION CAPILLARY GLC [J].
GERWIG, GJ ;
KAMERLING, JP ;
VLIEGENTHART, JFG .
CARBOHYDRATE RESEARCH, 1978, 62 (02) :349-357
[6]  
GERWIG GJ, 1979, CARBOHYD RES, V77, P1, DOI 10.1016/S0008-6215(00)83788-X
[7]  
KAMERLING JP, 1992, BIOL MAGN RESON, V10, P1
[8]   CONFORMATIONAL-ANALYSIS OF METHYL BETA-CELLOBIOSIDE BY ROESY NMR-SPECTROSCOPY AND MD SIMULATIONS IN COMBINATION WITH THE CROSREL METHOD [J].
KROONBATENBURG, LMJ ;
KROON, J ;
LEEFLANG, BR ;
VLIEGENTHART, JFG .
CARBOHYDRATE RESEARCH, 1993, 245 (01) :21-42
[9]   SAMPLING AND EFFICIENCY OF METRIC MATRIX DISTANCE GEOMETRY - A NOVEL PARTIAL METRIZATION ALGORITHM [J].
KUSZEWSKI, J ;
NILGES, M ;
BRUNGER, AT .
JOURNAL OF BIOMOLECULAR NMR, 1992, 2 (01) :33-56
[10]   CRYSTAL-STRUCTURE OF HUMAN CHORIONIC-GONADOTROPIN [J].
LAPTHORN, AJ ;
HARRIS, DC ;
LITTLEJOHN, A ;
LUSTBADER, JW ;
CANFIELD, RE ;
MACHIN, KJ ;
MORGAN, FJ ;
ISAACS, NW .
NATURE, 1994, 369 (6480) :455-461