Use of the Phoenix automated system for identification of Streptococcus and Enterococcus spp.

被引:25
作者
Brigante, Gioconda
Luzzaro, Francesco
Bettaccini, Alessia
Lombardi, Gianluigi
Meacci, Francesca
Pini, Beatrice
Stefani, a Stefani
Toniolo, Antonio
机构
[1] Univ Insubria, Lab Med Microbiol, I-21100 Varese, Italy
[2] Osped Circolo Varese, Lab Med Microbiol, I-21100 Varese, Italy
[3] Univ Siena, Dept Mol Biol, I-53100 Siena, Italy
[4] Univ Catania, Dept Microbiol Sci, Catania, Italy
关键词
D O I
10.1128/JCM.00299-06
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The Phoenix system (Becton Dickinson Diagnostic Systems, Sparks, MD) was evaluated for identification (ID) to the species level of streptococci and enterococci. Two hundred clinical isolates were investigated: beta-hemolytic streptococci (n = 50), Streptococcus pneumoniae organisms (n = 46), viridans group streptococci (n = 31), Enterococcus faecium (n = 36), Enterococcus faecalis (n = 25), and other catalase-negative cocci (n = 12). The API system (bioMerieux, Marcy l'Etoile, France) was used as a comparator. Molecular methods (sequencing of 16S rRNA and zwf and gki genes and ddl gene amplification) were used to investigate discordant results. Upon resolution of discrepancies, correct species ID was achieved by the Phoenix system for 121/129 (93.8%) streptococci and 63/70 (90.0%) enterococci. Excellent results were obtained for S. pneumoniae (45/45) and beta-hemolytic streptococci (49/50). With regard to viridans streptococci, the accuracy of the Phoenix system was 83.9%. Among the latter organisms, the best performance was obtained with isolates of the Streptococcus sanguinis group and Streptococcus anginosus group; problems were instead encountered with the Streptococcus mitis group. Four E. faecium and three E. faecalis isolates were misidentified as Enterococcus casseliflavus/Enterococcus gallinarum or Enterococcus durans. Thus, these isolates were identified only at the genus level. Compared with commercially available systems, the Phoenix system appears a reliable diagnostic tool for identifying clinically relevant streptococci and enterococci. The SMIC/ID-2 panel proved particularly effective for beta-hemolytic streptococci and pneumococci.
引用
收藏
页码:3263 / 3267
页数:5
相关论文
共 27 条
  • [1] Validation of VITEK 2 version 4.01 software for detection, identification, and classification of glycopeptide-resistant enterococci
    Abele-Horn, M
    Hommers, L
    Trabold, R
    Frosch, M
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2006, 44 (01) : 71 - 76
  • [2] Accuracy of phenotypic and genotypic testing for identification of Streptococcus pneumoniae and description of Streptococcus pseudopneumoniae sp nov.
    Arbique, JC
    Poyart, C
    Trieu-Cuot, P
    Quesne, G
    Carvalho, MDS
    Steigerwalt, AG
    Morey, RE
    Jackson, D
    Davidson, RJ
    Facklam, RR
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (10) : 4686 - 4696
  • [3] Comparison of conventional and molecular methods for identification of aerobic catalase-negative gram-positive cocci in the clinical laboratory
    Bosshard, PP
    Abels, S
    Altwegg, M
    Böttger, EC
    Zbinden, R
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (05) : 2065 - 2073
  • [4] Detection of the van alphabet and identification of enterococci and staphylococci at the species level by multiplex PCR
    Depardieu, F
    Perichon, B
    Courvalin, P
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (12) : 5857 - 5860
  • [5] Evaluation of the automated phoenix system for potential routine use in the clinical microbiology laboratory
    Donay, JL
    Mathieu, D
    Fernandes, P
    Prégermain, C
    Bruel, P
    Wargnier, A
    Casin, I
    Weill, FX
    Lagrange, PH
    Herrmann, JL
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (04) : 1542 - 1546
  • [6] DETECTION OF GLYCOPEPTIDE RESISTANCE GENOTYPES AND IDENTIFICATION TO THE SPECIES LEVEL OF CLINICALLY RELEVANT ENTEROCOCCI BY PCR
    DUTKAMALEN, S
    EVERS, S
    COURVALIN, P
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 1995, 33 (01) : 24 - 27
  • [7] Identification of Glycopeptide-resistant enterococci by VITEK 2 system and conventional and real-time polymerase chain reaction
    Eisner, A
    Gorkiewicz, G
    Feierl, G
    Leitner, E
    Köfer, J
    Kessler, HH
    Marth, E
    [J]. DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2005, 53 (01) : 17 - 21
  • [8] Endimiani A, 2002, MICROBIOLOGICA, V25, P323
  • [9] IDENTIFICATION, CLASSIFICATION, AND CLINICAL RELEVANCE OF CATALASE-NEGATIVE, GRAM-POSITIVE COCCI, EXCLUDING THE STREPTOCOCCI AND ENTEROCOCCI
    FACKLAM, R
    ELLIOTT, JA
    [J]. CLINICAL MICROBIOLOGY REVIEWS, 1995, 8 (04) : 479 - &
  • [10] What happened to the streptococci: Overview of taxonomic and nomenclature changes
    Facklam, R
    [J]. CLINICAL MICROBIOLOGY REVIEWS, 2002, 15 (04) : 613 - +