ImmPort: disseminating data to the public for the future of immunology

被引：664

作者：

Bhattacharya, Sanchita ^{[1
]}

Andorf, Sandra ^{[1
]}

Gomes, Linda ^{[2
]}

Dunn, Patrick ^{[2
]}

Schaefer, Henry ^{[3
]}

Pontius, Joan ^{[3
]}

Berger, Patty

Desborough, Vince ^{[2
]}

Smith, Tom ^{[2
]}

Campbell, John ^{[2
]}

Thomson, Elizabeth ^{[2
]}

Monteiro, Ruth ^{[2
]}

Guimaraes, Patricia ^{[2
]}

Walters, Bryan ^{[2
]}

Wiser, Jeff ^{[2
]}

Butte, Atul J. ^{[1
,4
]}

机构：

[1] Stanford Univ, Dept Pediat, Div Syst Med, Sch Med, Stanford, CA 94305 USA

[2] Northrop Grumman Informat Syst Hlth IT, Rockville, MD 20850 USA

[3] ESAC Inc, Rockville, MD 20850 USA

[4] Lucile Packard Childrens Hosp, Palo Alto, CA 94304 USA

来源：

IMMUNOLOGIC RESEARCH | 2014年 / 58卷 / 2-3期

关键词：

Flow cytometry; Open access; Publicly available data; Informatics; Clinical trials; CALCINEURIN INHIBITOR; RUSH IMMUNOTHERAPY; OMALIZUMAB; SUBSETS;

D O I：

10.1007/s12026-014-8516-1

中图分类号：

R392 [医学免疫学]; Q939.91 [免疫学];

学科分类号：

071005 [微生物学]; 100108 [医学免疫学];

摘要：

The immunology database and analysis portal (ImmPort) system is the archival repository and dissemination vehicle for clinical and molecular datasets created by research consortia funded by the National Institute of Allergy and Infectious Diseases Division of Allergy, Immunology, and Transplantation. With nearly 100 datasets now publicly available and hundreds of downloads per month, ImmPort is an important source for raw data and protocols from clinical trials, mechanistic studies, and novel methods for cellular and molecular measurements. To facilitate data transfer, templates for data representation and standard operating procedures have also been created and are also publicly available. ImmPort facilitates transparency and reproducibility in immunology research, serves as an important resource for education, and enables newly generated hypotheses and data-driven science.

引用

页码：234 / 239

页数：6

共 23 条

[1]

[Anonymous], SCI TRANSL MED, DOI [DOI 10.1126/SCITRANSLMED.3002409, 10.1126/scitranslmed.3007094, DOI 10.1126/SCITRANSLMED.3007094]

[2]

[Anonymous], 2012, EVOLUTION TRANSLATIO

[3]

Raise standards for preclinical cancer research [J].

Begley, C. Glenn ;

Ellis, Lee M. .

NATURE, 2012, 483 (7391) :531-533

[4]

A Randomized Double-Blind, Placebo Controlled Trial of Steroid Withdrawal after Pediatric Renal Transplantation [J].

Benfield, M. R. ;

Bartosh, S. ;

Ikle, D. ;

Warshaw, B. ;

Bridges, N. ;

Morrison, Y. ;

Harmon, W. .

AMERICAN JOURNAL OF TRANSPLANTATION, 2010, 10 (01) :81-88

[5]

Omalizumab pretreatment decreases acute reactions after rush immunotherapy for ragweed-induced seasonal allergic rhinitis [J].

Casale, TB ;

Busse, WW ;

Kline, JN ;

Ballas, ZK ;

Moss, MH ;

Townley, RG ;

Mokhtarani, M ;

Seyfert-Margolis, V ;

Asare, A ;

Bateman, K ;

Deniz, Y .

JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, 2006, 117 (01) :134-140

[6]

Differentially Expressed RNA from Public Microarray Data Identifies Serum Protein Biomarkers for Cross-Organ Transplant Rejection and Other Conditions [J].

Chen, Rong ;

Sigdel, Tara K. ;

Li, Li ;

Kambham, Neeraja ;

Dudley, Joel T. ;

Hsieh, Szu-chuan ;

Klassen, R. Bryan ;

Chen, Amery ;

Caohuu, Tuyen ;

Morgan, Alexander A. ;

Valantine, Hannah A. ;

Khush, Kiran K. ;

Sarwal, Minnie M. ;

Butte, Atul J. .

PLOS COMPUTATIONAL BIOLOGY, 2010, 6 (09)

[7]

Immune Profile of Pediatric Renal Transplant Recipients following Alemtuzumab Induction [J].

De Serres, Sacha A. ;

Mfarrej, Bechara G. ;

Magee, Ciara N. ;

Benitez, Fanny ;

Ashoor, Isa ;

Sayegh, Mohamed H. ;

Harmon, William E. ;

Najafian, Nader .

JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2012, 23 (01) :174-182

[8]

Computational Repositioning of the Anticonvulsant Topiramate for Inflammatory Bowel Disease [J].

Dudley, Joel T. ;

Sirota, Marina ;

Shenoy, Mohan ;

Pai, Reetesh K. ;

Roedder, Silke ;

Chiang, Annie P. ;

Morgan, Alex A. ;

Sarwal, Minnie M. ;

Pasricha, Pankaj Jay ;

Butte, Atul J. .

SCIENCE TRANSLATIONAL MEDICINE, 2011, 3 (96)

[9]

Safety and efficacy of a calcineurin inhibitor avoidance regimen in pediatric renal transplantation [J].

Harmon, William ;

Meyers, Kevin ;

Ingelfinger, Julie ;

McDonald, Ruth ;

McIntosh, Matthew ;

Ho, Martin ;

Spaneas, Leslie ;

Palmer, Jo Ann ;

Hawk, Marena ;

Geehan, Chris ;

Tinckam, Kathryn ;

Hancock, Wayne W. ;

Sayegh, Mohamed H. .

JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2006, 17 (06) :1735-1745

[10]

Subsets of human CD4+ regulatory T cells express the peripheral homing receptor CXCR3 [J].

Hoerning, Andre ;

Koss, Kerith ;

Datta, Dipak ;

Boneschansker, Leonard ;

Jones, Caroline N. ;

Wong, Ian Y. ;

Irimia, Daniel ;

Calzadilla, Katiana ;

Benitez, Fanny ;

Hoyer, Peter F. ;

Harmon, William E. ;

Briscoe, David M. .

EUROPEAN JOURNAL OF IMMUNOLOGY, 2011, 41 (08) :2291-2302

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