Modular chemical mechanism predicts spatiotemporal dynamics of initiation in the complex network of hemostasis

被引:66
作者
Kastrup, Christian J.
Runyon, Matthew K.
Shen, Feng
Ismagilov, Rustern F.
机构
[1] Univ Chicago, Dept Chem, Chicago, IL 60637 USA
[2] Univ Chicago, Inst Biophys Dynam, Chicago, IL 60637 USA
关键词
complexity; microfluiclics; networks; tissue factor; nonlinear;
D O I
10.1073/pnas.0605560103
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
This article demonstrates that a simple chemical model system, built by using a modular approach, may be used to predict the spatiotemporal dynamics of initiation of blood clotting in the complex network of hemostasis. Microfluidics was used to create in vitro environments that expose both the complex network and the model system to surfaces patterned with patches presenting clotting stimuli. Both systems displayed a threshold response, with clotting initiating only on isolated patches larger than a threshold size. The magnitude of the threshold patch size for both systems was described by the Damkohler number, measuring competition of reaction and diffusion. Reaction produces activators at the patch, and diffusion removes activators from the patch. The chemical model made additional predictions that were validated experimentally with human blood plasma. These experiments show that blood can be exposed to significant amounts of clot-inducing stimuli, such as tissue factor, without initiating clotting. Overall, these results demonstrate that such chemical model systems, implemented with microfluidics, may be used to predict spatiotemporal dynamics of complex biochemical networks.
引用
收藏
页码:15747 / 15752
页数:6
相关论文
共 46 条
[1]   Characterization of a new caged proton capable of inducing large pH jumps [J].
Barth, A ;
Corrie, JET .
BIOPHYSICAL JOURNAL, 2002, 83 (05) :2864-2871
[2]   Coagulation on biomaterials in flowing blood: Some theoretical considerations [J].
Basmadjian, Diran ;
Sefton, Michael V. ;
Baldwin, Susan A. .
1997, Elsevier Science Ltd, Oxford, United Kingdom (18) :1511-1522
[3]   A synthetic multicellular system for programmed pattern formation [J].
Basu, S ;
Gerchman, Y ;
Collins, CH ;
Arnold, FH ;
Weiss, R .
NATURE, 2005, 434 (7037) :1130-1134
[4]   MATHEMATICAL-ANALYSIS OF ACTIVATION THRESHOLDS IN ENZYME-CATALYZED POSITIVE FEEDBACKS - APPLICATION TO THE FEEDBACKS OF BLOOD-COAGULATION [J].
BELTRAMI, E ;
JESTY, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (19) :8744-8748
[5]   The role of membrane patch size and flow in regulating a proteolytic feedback threshold on a membrane: possible application in blood coagulation [J].
Beltrami, E ;
Jesty, J .
MATHEMATICAL BIOSCIENCES, 2001, 172 (01) :1-13
[6]   A perspective on enzyme catalysis [J].
Benkovic, SJ ;
Hammes-Schiffer, S .
SCIENCE, 2003, 301 (5637) :1196-1202
[7]  
Bird R B., 2002, Transportphenomena
[8]  
Bogdanov VY, 2004, NAT MED, V10, P1156, DOI 10.1038/nm1104-1156
[9]   Active tissue factor in blood? [J].
Butenas, S ;
Mann, KG .
NATURE MEDICINE, 2004, 10 (11) :1155-1156
[10]   Oscillatory thermomechanical instability of an ultrathin catalyst [J].
Cirak, F ;
Cisternas, JE ;
Cuitiño, AM ;
Ertl, G ;
Holmes, P ;
Kevrekidis, IG ;
Ortiz, M ;
Rotermund, HH ;
Schunack, M ;
Wolff, J .
SCIENCE, 2003, 300 (5627) :1932-1936