Proposal of Cobetia marina gen. nov., comb. nov., within the family Halomonadaceae, to include the species Halomonas marina

被引:104
作者
Arahal, DR
Castillo, AM
Ludwig, W
Schleifer, KH
Ventosa, A [1 ]
机构
[1] Univ Sevilla, Dept Microbiol & Parasitol, Fac Farm, E-41012 Seville, Spain
[2] Tech Univ Munich, Lehrstuhl Mikrobiol, D-8050 Freising Weihenstephan, Germany
关键词
Halomonadaceae; Halomonas; Halomonas marina; taxonomy; phylogeny; Cobetia gen. nov; moderately halophilic bacteria;
D O I
10.1078/0723-2020-00113
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
At present the family Halomonadaceae consists of four genera and the taxonomic status of all species included in these genera is not equally supported by phylogenetic evidence. Whereas Zymobacter and Carnimonas contain one single species each and form the deeper branch of the family, the genus Halomonas contains currently 22 species, with a maximum 16S/23S rRNA sequence divergence greater than it could be expected for species of the same genus. In addition, we have witnessed during last years an increase in the number of new species within this group, which makes even more necessary a taxonomic rearrangement. In a previous study (ARAHAL et al., 2002) we evaluated the phylogenetic status of the family Halomonadaceae based on 23S and 16S rDNA sequence analyses and mentioned that Halomonas marina could eventually be assigned to a new genus. In this study we have emended the description of this species, including new features and propose its placement in a new genus, Cobetia gen. nov. within the family Halomonadaceae. The type strain of Cobetia marina is ATCC 25374(T) (= DSM 4741(T)). Further discussion on the phylogeny of the family Halomonadaceae is provided taking into account the most recent changes.
引用
收藏
页码:207 / 211
页数:5
相关论文
共 21 条
[1]  
AKAGAWA M, 1989, INT J SYST BACTERIOL, V39, P382
[2]   Phylogeny of the family Halomonadaceae based on 23S and 16S rDNA sequence analyses [J].
Arahal, DR ;
Ludwig, W ;
Schleifer, KH ;
Ventosa, A .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2002, 52 :241-249
[3]   Chromohalobacter salexigens sp nov., a moderately halophilic species that includes Halomonas elongata DSM 3043 and ATCC 33174 [J].
Arahal, DR ;
García, MT ;
Vargas, C ;
Cánovas, D ;
Nieto, JJ ;
Ventosa, A .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1457-1462
[4]   Transfer of Halomonas canadensis and Halomonas israelensis to the genus Chromohalobacter as Chromohalobacter canadensis comb. nov and Chromohalobacter israelensis comb. nov. [J].
Arahal, DR ;
García, MT ;
Ludwig, W ;
Schleifer, KH ;
Ventosa, A .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1443-1448
[5]   DESCRIPTION OF DELEYA GEN-NOV CREATED TO ACCOMMODATE THE MARINE SPECIES ALCALIGENES-AESTUS, ALCALIGENES-PACIFICUS, ALCALIGENES-CUPIDUS, ALCALIGENES-VENUSTUS, AND PSEUDOMONAS-MARINA [J].
BAUMANN, L ;
BOWDITCH, RD ;
BAUMANN, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1983, 33 (04) :793-802
[6]   TAXONOMY OF AEROBIC MARINE EUBACTERIA [J].
BAUMANN, L ;
BAUMANN, P ;
ALLEN, RD ;
MANDEL, M .
JOURNAL OF BACTERIOLOGY, 1972, 110 (01) :402-+
[7]   Halomonas maura sp nov., a novel moderately halophilic, exopolysaccharide-producing bacterium [J].
Bouchotroch, S ;
Quesada, E ;
del Moral, A ;
Llamas, I ;
Béjar, V .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1625-1632
[8]   EFFECT OF NICKEL ON A MARINE BACTERIUM, ARTHROBACTER-MARINUS SP-NOV [J].
COBET, AB ;
WIRSEN, C ;
JONES, GE .
JOURNAL OF GENERAL MICROBIOLOGY, 1970, 62 (AUG) :159-+
[9]   Unification of the genera Deleya (Baumann et al 1983), Halomonas (Vreeland et al 1980), and Halovibrio (Fendrich 1988) and the species Paracoccus halodenitrificans (Robinson and Gibbons 1952) into a single genus, Halomonas, and placement of the genus Zymobacter in the family Halomonadaceae [J].
Dobson, SJ ;
Franzmann, PD .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (02) :550-558
[10]  
Duckworth AW, 2000, EXTREMOPHILES, V4, P53